68eaeb831e4a4d2df78f848ab5210a7f *DESCRIPTION
a3443eb01e9594f0ba5a9cfa46e4722e *NAMESPACE
9be4f88b6cd3b30b25b1f70dd1ca93fb *NEWS
4a2e77e297dbac190d1c741c85859680 *R/AllClasses.R
229ce75c8eabe1a18666fe73f6e1cda2 *R/AllGenerics.R
3d3616154643e9a1b56e9d09ddbd2bb8 *R/AllMethods.R
6ef4f7b2ab3154f1d4649524373cd02d *R/DataInput.R
28c55a8d93382a87ac97384f966c4546 *R/GeneRanking.R
aa7f2c87fb68a3fd35566725a2b73dea *R/Normalization.R
5c3d792653691d54e66d4e177e079e05 *R/QualityControl.R
8869df44d88068f2aafc41c820b5af95 *R/core.R
77f30056fc8d2a0e13d4fbbc470f4deb *R/sgrnaRanking.R
10454c2e17359bbbe25c0466fc0d7f1e *README.md
38b34ac421c28ada0a0c93c323146328 *build/vignette.rds
a036878e134b4c66ffc602c491ced554 *inst/CITATION
7796f9032a27e41cc6afc2466a3b44a3 *inst/doc/gscreend_simulated_data.R
53d018e7074bf4ad350349927a46b568 *inst/doc/gscreend_simulated_data.Rmd
715eac9c73811dea0d731124f2f88c6a *inst/doc/gscreend_simulated_data.html
2734c23f85de8b73b891ae7a2f11f134 *inst/extdata/gscreend_analysed_experiment.RData
b457cdbb4bf6a64a019bd2751ac18cc8 *inst/extdata/simulated_counts.txt
2cb1781c52f47e6edeeab83e7c7f0347 *inst/script/generate_simulated_counts.txt
b6f1347a5488cd6db2add2f5c65f6f43 *man/GeneData-PoolScreenExp-method.Rd
e7e343d521d2741d463c6bbbbda982db *man/GeneData.Rd
a64387e489e828c261942ff24ac7c865 *man/PoolScreenExp-class.Rd
952ff62ea3570a1ef259a48886cbdd56 *man/ResultsTable.Rd
e69c8679680533b1e9fe2e3fdeccbf83 *man/RunGscreend.Rd
e4a1745885d2f29afe05f24a48b986d5 *man/assignGeneData.Rd
f41c4079ca8ca75b47d6a1c3c11546fd *man/calculateIntervalFits.Rd
0c659274c768bae5ae6eb5ca43acdc3e *man/calculateLFC.Rd
636f2cd5eaa3dd3bc1709a0552259dd3 *man/calculatePValues.Rd
c9f22ae825c83380f97bd94a50e2b504 *man/createPoolScreenExp.Rd
ac0f3904a32bec4fe0ab19de0c744cf4 *man/createPoolScreenExpFromSE.Rd
3b71040a767af56e76ed9eec86c26a16 *man/defineFittingIntervals.Rd
2d0ed2c030c033da25dacef8c94378ba *man/fit_least_quantile.Rd
0339045186aaad8647396966635c17c0 *man/normalizePoolScreenExp.Rd
c5a1798c9839bf075c6062cecd098218 *man/plotModelParameters.Rd
8558860f27bcfc314c8d35aed02fad4a *man/plotReplicateCorrelation.Rd
1ec6d8f865be53d85d61cbc1f8afad3e *man/sgRNAData-PoolScreenExp-method.Rd
5769c2cdf1ff933002a52463af358374 *man/sgRNAData.Rd
fa102413e86b447eb42083093c1305d1 *tests/testthat.R
5712b66c6a79cf1ba265c20cef60ccab *tests/testthat/test_1_input.R
3ee8777db4d4c6238c21807a2722affb *tests/testthat/test_2_QC.R
9fe73e3932746608e498828cb95f02da *tests/testthat/test_3_calculations.R
53d018e7074bf4ad350349927a46b568 *vignettes/gscreend_simulated_data.Rmd
