0be91600e3737f05e38e485552fabe17 *DESCRIPTION
88bc39861a0f3afa01afc5cc0808ea30 *LICENSE
9f99449c68727073d2fab601a09ec7dd *NAMESPACE
e5ecc841f9e30ccc4bec9ffd2883847b *NEWS
caa49f68e627dbd5d64a9b4e3da22d62 *R/ggkegg.R
64fb5944c5d6e32109e4f4970b40002d *R/highlight_functions.R
f10d23c20a4c532a81b54715b7ed4b28 *R/module_functions.R
83a357440999c7d74444114e76c1e457 *R/network_functions.R
c1ff2c858fd153521b7c4a19192641c2 *R/overlay_functions.R
c754b269f18888c93ee283882abf4726 *R/pathway_functions.R
dc77e5e262b14b65e8526fa651c3cc47 *R/plot_functions.R
0574d3c29190c8d76a70c88b50b7d293 *R/stamp.R
79a1a7d72e3e393bcce3daa81e738108 *R/utils.R
3e37f46f1ac5c01d77d4a94afa6f8119 *README.Rmd
14a85afe35f0f033b904ea16e788eda6 *README.md
927cfd97b004b948739642a8e24f2ca3 *build/vignette.rds
1d65be46b45c62ebfcf7103f75f21afd *inst/CITATION
5d434a8d67da4771c1928167c62fdda1 *inst/doc/usage_of_ggkegg.R
28b1bf3a51030b03ca7aff797e8816bf *inst/doc/usage_of_ggkegg.Rmd
0380e2761b9e168957f9ac43b1840bc8 *inst/doc/usage_of_ggkegg.html
bb3a89c42ca1cb24dac6ad64b415d677 *man/add_readable_edge_label.Rd
88b1482cde737918ba39572b790449a5 *man/add_title.Rd
d9d9e0494fba915998ac21c8d81d6dbf *man/append_cp.Rd
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3a4c3eea2fe5c7fc8bd97ac52d68bf63 *man/assign_deseq2.Rd
10e72459e2d7cef7c2479b473502f881 *man/carrow.Rd
74b2fd1c768938b23d3e4c26bf2523fc *man/combine_with_bnlearn.Rd
7d2ec53d1b452686e709b535d12dcad2 *man/convert_id.Rd
0b85a7cc1395a10cb0eccd276bb36d48 *man/create_test_module.Rd
1c7a8c97836166570507e05db7b8c220 *man/create_test_network.Rd
2de315cac4c13def1fb67f623da16bd1 *man/create_test_pathway.Rd
85349ae26d55fa5e750832d23bd2b918 *man/edge_matrix.Rd
0a2be78076eaf28d8960305d0d27abf1 *man/edge_numeric.Rd
8fa7a88288a93e1af33c1f9cf428b987 *man/edge_numeric_sum.Rd
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a871a7c05a8d12806ad4c3c94f94fadf *man/geom_kegg.Rd
397c7b0aa4e96cb27842680c473474c4 *man/geom_node_rect.Rd
054ba0a063117084891bfca657f00b71 *man/geom_node_rect_kegg.Rd
6f50441f8d4d050cf3a0ca06673f07af *man/geom_node_rect_multi.Rd
1b84379a148ff37f50fd8307d2f45aa9 *man/geom_node_shadowtext.Rd
dec9b6e018b502be60fe8c9780aef3cc *man/get_module_attribute-kegg_module-method.Rd
55af6bcc3ef468a6c11a13b70c017980 *man/get_module_attribute.Rd
307a72bf85ffc87ac543fd7b71f0f88d *man/get_network_attribute-kegg_network-method.Rd
7dd801cbe66e63ec5f3a04281beb0826 *man/get_network_attribute.Rd
66b843c30c050820a49f230f781e9a2e *man/ggkegg.Rd
7d620d5fe766e2ebe1b69dac8f0ae0cc *man/ggkeggsave.Rd
9b01781fd569d562beec685ab22398e5 *man/ggplot_add.add_readable_edge_label.Rd
999f4fbf5625a121d069e32d9f28ef75 *man/ggplot_add.geom_kegg.Rd
c25596de3b63b938f229ec7000c9b942 *man/ggplot_add.geom_node_rect_kegg.Rd
cd9adaeba1291cfeece383bb2ce23065 *man/ggplot_add.geom_node_rect_multi.Rd
cd5322224490b4dcbcff02df36e5d5ff *man/ggplot_add.overlay_raw_map.Rd
518cb1ce0cce68426b2e2661de72fc79 *man/ggplot_add.stamp.Rd
68b3f6e615dab8f52690f0a475d2d3bf *man/highlight_entities.Rd
c8711fed00c9cf10511a3baeb67348b3 *man/highlight_module.Rd
3346c63f5389d0a8798a81da4b07b444 *man/highlight_set_edges.Rd
36c9dba9e14c3ab172d4ad575a35aecb *man/highlight_set_nodes.Rd
6fe5255a1d1031d2315102ae4d5f7008 *man/module.Rd
78a2339f8d03f7f41c982c5d1e3b163d *man/module_abundance.Rd
e059d6eb25569a6ee281d2d0c97a4236 *man/module_completeness.Rd
e044c1dfd3c681bc53447e47b68a95a4 *man/module_text.Rd
5785ae2391dc12110e81b05f08205fdb *man/multi_pathway_native.Rd
a660488ea4dfbc817a9bd860e5605415 *man/network.Rd
2e4ab3adda51c44d1f56de8d25e31898 *man/network_graph.Rd
3c841f634795577ea9a5174a4076e42e *man/node_matrix.Rd
442a9b130aa106c0edd0f30d9ab9f13d *man/node_numeric.Rd
c34fa2e1ca90b0ddb4b935b4c92330a9 *man/obtain_sequential_module_definition.Rd
4b125e9665f8e4d744372622b9af234c *man/output_overlay_image.Rd
d02711434bd35415d022d32692dbe327 *man/overlay_raw_map.Rd
ed3cae52bf5bd0c8d2599362b03742a2 *man/pathway.Rd
446d4b8ad9892f293838ad975e19dfe4 *man/pathway_abundance.Rd
682d8d79634c77d8b068e3c858572e35 *man/pathway_info.Rd
c860ae8bb303cc6c3cb56f032350a03e *man/plot_kegg_network.Rd
54d648a8e6c9ae0528ba13e17afe065a *man/plot_module_blocks.Rd
253c0408e433ab8ab52a49b26b79c7dd *man/plot_module_text.Rd
1a11c83042b7551bf5b2957de3367a4d *man/process_line.Rd
3b70c3815e9b21e04f93457e95cca9b0 *man/process_reaction.Rd
105d1a2dc88cf472a50bf4fcdfb93414 *man/rawMap.Rd
eb5fd80cac5eafba712061c8c750c6fe *man/rawValue.Rd
f9b58da8f277afe0da58f742ea179692 *man/return_line_compounds.Rd
a1eeb009c7424d46b9714449fc7c57b0 *man/stamp.Rd
c7f715e442f5445dd2490179bb3bd8c0 *tests/testthat.R
3afadcc34d80f624a4e7f63798c14ade *tests/testthat/test-highlight.R
c8cd33c44c0ce45b39eee5084d8b3946 *tests/testthat/test-module.R
b8220aab6c658a3bbbba9465729e01d5 *tests/testthat/test-network.R
29778437687ee66fa770ee2e534056f5 *tests/testthat/test-pathway.R
ac3f3e1d23c152ce7fc1e6da988833d0 *tests/testthat/test-utils.R
28b1bf3a51030b03ca7aff797e8816bf *vignettes/usage_of_ggkegg.Rmd
