3e0e0ab72b00f197b25c5f3b4b01f5cb *DESCRIPTION
92eee93ed8bc9be9742ebb38ccf15641 *NAMESPACE
11af035a1b4c483a2125d1d27f64c8e1 *R/allPeakLengths.r
e02f90c26f82f557a0c089df5b9832bd *R/annotate.r
db4e1f6b63cc908978bb0ae97937d1ff *R/annotate_n.r
abdceadfb3fc9b4aab0c2436e2d27280 *R/barChart.r
3273fd274bfac0859c95e583dd0e1e08 *R/cumlinePlot.r
be74995e9e29c5bd7df859da5e7f2fb6 *R/diffGO.R
db754aa20366ed09378ca16884eefae6 *R/distinct.r
3609772db1e81f3d358a4ff91efd0b20 *R/geneXtender.r
5bdb71a5a7081c60c2fd3e98bbbf1ebb *R/gene_annotate.r
288ba9ce94e319df081933b847317c00 *R/gene_lookup.r
3f20051067961ca8263243b73b881f8d *R/hotspotPlot.r
fcf0019b0a12b6f71c721b89a76830e6 *R/linePlot.r
f35a29e3661feeb3f1eb3317938b1239 *R/makeNetwork.r
a4819e23a67d0dbe8ddde31d1baae8e0 *R/makeWordCloud.r
37e5be8de3baec2cbb29a96eda0d5aae *R/meanPeakLength.r
5584758c96f1abd9e666ab71230aa86d *R/meanPeakLengthPlot.r
709f5c4d981dcbf389e5745a9c73e63d *R/peakLengthBoxplot.r
3c69fcec0764ab6c118baca93c052b70 *R/peak_input_docs.r
efda31f0517c7eeaf5264927d2bc0cbd *R/peaksInput.r
0951eaebda705230e80833c2c0d41c29 *R/peaksMerge.r
e72b9d0f7289adc24125b6d5c0b97121 *R/plotWordFreq.r
66a361c0cdada1ec3b39316e1e38e2eb *R/rat.r
329223af3782930328a566c87fe85cd6 *README.md
36ec1fd0b180ee0e55a0abda92fa42d7 *data/datalist
19ed611292d76cb5d79c9c485fd7ca2e *data/rat.rda
e2d5393ef40e8fa29e14ba84370f6bd6 *data/samplepeaksinput.rda
dde20ac99f04730fa8dd1cf100bf470e *inst/CITATION
9f3f6fca18e98afc98b8737172c9fd51 *inst/doc/geneXtendeR.pdf
0a7213fa9e6eeb726c574b168205c613 *inst/extdata/cisgenomeischemiapeaks.txt
21b3cc5c462facdc18b0258952ac469b *inst/extdata/sicerischemiapeaks.txt
94121b883294860710daba1442ee6f40 *inst/extdata/significantpeaksfile.txt
b643b959ae2f0e59e056abf1b90334af *inst/extdata/somepeaksfile.txt
b643b959ae2f0e59e056abf1b90334af *inst/extdata/totalpeaksfile.txt
ad45842c309eba587fccb047e75ddbbb *man/allPeakLengths.Rd
0f9f28cfa4a95869fca53db8f43b7ab4 *man/annotate.Rd
9d38a0e68a127338dce17249d7e06e87 *man/annotate_n.Rd
839ee84a91e10574c307acb719d27013 *man/barChart.Rd
cc9c992b633b531eb32ebc16319a622c *man/cumlinePlot.Rd
8b27f9393098e2588c902f0dd1d16f46 *man/diffGO.Rd
4bd9fbdbad0eb3c03af57d32014ebd2a *man/distinct.Rd
1e510961df119cb001dc7bdd3652859d *man/dot-geneXtender.Rd
0d08a0639bad0b7cad3d6ce1c10b2f7d *man/gene_annotate.Rd
6617a3d168be774bd67fe4a6b1a02fdf *man/gene_lookup.Rd
91396cb9585be010117e6a98bfaabbc6 *man/hotspotPlot.Rd
63a420aa443317ae0676424203fbd075 *man/linePlot.Rd
109951b75a7c38264a9eaf67d8d4b630 *man/makeNetwork.Rd
db19c3da1641e80587d12fe572c01917 *man/makeWordCloud.Rd
d172bb9fc1d5a3bb85a479b1aa5ab9a0 *man/meanPeakLength.Rd
eaaf9a10e79cb54b23698a6e0800dc76 *man/meanPeakLengthPlot.Rd
277aa194bb887f227b5e2d8c5b6fc887 *man/peakLengthBoxplot.Rd
8f3e50f53a68eccb1f2b65486b5d4a62 *man/peaksInput.Rd
c3d723da1864262d63192e65d0bb8dbe *man/peaksMerge.Rd
471930fa2e43c52e147b03b5506fd9f8 *man/plotWordFreq.Rd
ff430d8110c616d2ea73447fcb4c30ab *man/rat.Rd
984a05b02e6d453814fcba1565774030 *man/samplepeaksinput.Rd
8c77b83cb52d4f12f200772025b8ab53 *src/annotate.c
5398d9e8c5ca07c7efb61583a50c3a57 *src/extract_number.c
349bd6b6b9f39fe34b41a69eaa452d2f *src/extract_peaks.c
34d90821c6590ec95ff9333d3ca30dca *tests/testthat.R
9e682f0156e84078a2f296293bfa2402 *tests/testthat/Rplots.pdf
1c422d798438961578b05ea5769716a0 *tests/testthat/test-allPeakLengths.R
5b8c92507defb311b53767c042b9278e *tests/testthat/test-annotate.R
1224cda501a04777e28eb9ad8ee991a1 *tests/testthat/test-annotate_n.R
3d8bf60cc973751443795af9963538d3 *tests/testthat/test-barChart.R
b7e3b466a5dbaf6ae76596b2cebce650 *tests/testthat/test-cumlinePlot.R
dde6af352a2981688b33a35a4709ce63 *tests/testthat/test-diffGO.R
d378bd96a6fa10a83037f2889e962f51 *tests/testthat/test-distinct.R
404f85b221616fe04fb8cb3b19d4ae34 *tests/testthat/test-geneXtender.R
0521725704d6e46619fe04f5b9fbbb7d *tests/testthat/test-gene_annotate.R
9a64f3c88d312d94135adf9d8749f928 *tests/testthat/test-gene_lookup.R
7a2bc052950849d17650f620a3b7b979 *tests/testthat/test-hotspotPlot.R
7cd476a56784e908301da4a0304b740d *tests/testthat/test-linePlot.R
d4c6a6933ad0c2de944cdadb2b5e9606 *tests/testthat/test-makeNetwork.R
a7dc4f6376252a508bbd542f1a194425 *tests/testthat/test-makeWordCloud.R
7ef9041bfeec8af71b8bc02172f50694 *tests/testthat/test-meanPeakLength.R
ad47042dedd9f7f9ebb93edcfb37f67c *tests/testthat/test-peaksInput.R
2efb29743eefffee017bd7b5a87e7cc8 *vignettes/figures/Ischemia_violin_plot.png
2ef93ea9c61371fb7395f500a35ad04b *vignettes/figures/cisgenomerun.png
e4580b9edf59a317a88a3d5b4ed9720a *vignettes/figures/geneXtendeRlogo.png
e2464b65915a7b768ecc0851c04967db *vignettes/figures/mousegeneann2000.png
bf9c1d11587b75c6205c2a0e2931ba5b *vignettes/figures/mousemtor.png
7cb4f61c2329ceb7893042e04b459830 *vignettes/figures/ndimen.png
18d2d9217bcabed4bb912ee34a6c28d9 *vignettes/figures/sicerrun.png
a137e187cffb616f0929aebcd18b5131 *vignettes/figures/vignette_annotate_2400.PNG
c9f0bbfd94443ca6f4d67cc5f5fd12c1 *vignettes/figures/vignette_annotate_3500_3.png
6122e03ff4f0a56e7e58e57711ad7da8 *vignettes/figures/vignette_gene_annotate_2400.PNG
2dbd5c1be623a8f55d62b890f5ece840 *vignettes/figures/vignette_gene_annotate_example.png
334e9ff09257d98a10c042dc22608cd3 *vignettes/figures/vignette_gene_lookup_zbtb16_19.png
fe88f1a069fc266db2481977ad719e8a *vignettes/figures/vignette_network_Gprc5b.png
8259f5d369ae9d5813db877270e24c3f *vignettes/figures/vignette_network_birdseye.png
79b11c41148d99bbaf84140b3966407a *vignettes/figures/vignette_wordcloud.png
eec1e97405a2b1936da7722e24f145e4 *vignettes/figures/vignette_wordfreq.png
fb7a15ffb78bf017cb1f62e6fce65f86 *vignettes/figures/workflow.pdf
5afb3a3836018083b3d62cf1165ca197 *vignettes/geneXtendeR.Rnw
b643b959ae2f0e59e056abf1b90334af *vignettes/somepeaksfile.txt
