c1b2cafe268876244c23ad6d30e944d9 *DESCRIPTION
a0c3772638a2650095cfd54b76f7d8e4 *LICENSE
0903a38b37c799a822af512571227e62 *NAMESPACE
4dac9ae386a2c5d909690564d21eb247 *R/AllClasses.R
c1715853af02a9954962cd29a6edf184 *R/AllGenerics.R
33a00740ea9452f5ec83a482b0aa1756 *R/ExpressionSet-methods.R
e40e99f7468e45bb75df819b88e8ac73 *R/deFit-methods.R
7d13881e251ec5288a4e4b10256ffb9c *R/deSet-methods.R
d7956c62bda06c950e24065be9afe61d *R/edge.R
ee5dae867a65baac51d2a384f8665a4c *R/form_models.R
77a45c523b0db8fd055592fb504f0b8a *R/getMethods.R
710d58e90e95e7eba5b2e70479c68b7a *R/kl_clust-functions.R
ca4c246ec783340033f4385a8a8628cf *R/lrt-functions.R
838e1f9a4faf96f855ab418a2e37db62 *R/misc.R
d83271ba2781f2fe3c07bfe9691802cd *R/odp-functions.R
faddd967ca10421920eee10a0520cb4e *R/setMethods.R
4d621f2c0eeb8a4fb1d69147de5b15ad *R/wls.R
3bd3d5f62ee90c4e5d45987ec8655816 *README.md
b7eae0f9631826609e9b1a28a6c8bdab *build/vignette.rds
aa7a9e3d123514e52f62e485733a0fea *data/endotoxin.rda
ba55fd10e95c4b47e22319160d647fcb *data/gibson.rda
93662621f491dada6687b4e71872f563 *data/kidney.rda
723c0e1dfc0008dae3d74c0a30cdfbd9 *inst/NEWS
ff7ee4ab45fff6ea31e4773db7355718 *inst/doc/edge.R
e0b600fa62b871c278c87aa0839e7a24 *inst/doc/edge.Rnw
b8223be814dd629719ccd0e107dfa2b5 *inst/doc/edge.pdf
c7322682f56b4e7c7bb3b781fd71c250 *man/apply_qvalue.Rd
bb89fbd5a2c0f743fb5f3bec89e7ecca *man/apply_sva.Rd
3b3861f3d15f461e03efd0b4df6c7244 *man/betaCoef.Rd
070675c06dfb7e7c4db18c51fea96045 *man/build_models.Rd
db2dba777cf19207912e56c443db20b6 *man/build_study.Rd
de3a7b8f1c12c3250ea8deeab8ce885d *man/deFit-class.Rd
d2ab7a0bc58880282a2424aa188efa80 *man/deSet-class.Rd
1875152b4911349a76f4d2cf1e967f90 *man/deSet.Rd
2982718574f264c1607f4aa34e780601 *man/edge.Rd
f37936315f12e7180c09ef216757e5ec *man/endotoxin.Rd
d53ece9ad0378f4f9818251d8388cc87 *man/fitFull.Rd
ec4fc51e9eac4f2582586de2ede810eb *man/fitNull.Rd
cac1536f33b67a39bf887dff7d04e04a *man/fit_models.Rd
2eddca08a1122997029c57ec7d9e2252 *man/fullMatrix.Rd
e5238e5d018a925149eca6c4f0cf0f6c *man/fullModel.Rd
94202f23f29f49e128a3c784a177aad4 *man/gibson.Rd
21dd345060f71d08cd7044f56f24c64f *man/individual.Rd
95ee0fe6a16bae40c20bda5d60e907eb *man/kidney.Rd
6e161bf4e29bf9a812c1cf351d9a33a6 *man/kl_clust.Rd
dab2c582509eb1c4f46583b068918255 *man/lrt.Rd
32d452d65ea2ff4ea39085af73ceadca *man/nullMatrix.Rd
e8a5731be305e11a69f1ba1c14e8fa5b *man/nullModel.Rd
866859f8dde30863118d50f067a00b0b *man/odp.Rd
b4a18f99e0ee6f6ce958716e42ce408c *man/qvalueObj.Rd
28110ed0c112423b486cfd22700587d5 *man/resFull.Rd
dc0b0d2d07aad56f943d719f90f66105 *man/resNull.Rd
277ce10033838351ccf7cc85ffabfc12 *man/sType.Rd
493a2e39f440d9f93fc9713c6ec08374 *man/show.Rd
0464888494b4b55c6c34ff0ef5585222 *man/summary.Rd
812cea0c94b370ddeb1b0a1a67ccb5ba *src/edge-init.c
e20859f9361a857f3fd2560b94cb1aa8 *src/edgeKLODP.c
f3220a0aa83c0da86747f6be9ee731a0 *src/edgeKLODP.h
e4e59cb6c365d1b091b585b51ce0d27d *tests/testthat.R
0dcd0c33cbed80dc3db7b72e9138befb *tests/testthat/test-edgeSet.R
6026d502f59b877c6723ecc06294fdac *tests/testthat/test-modelCreation.R
e0b600fa62b871c278c87aa0839e7a24 *vignettes/edge.Rnw
925d43be920b7fd93551422edb83bbf7 *vignettes/edgecomp.pdf
ee628b7c7e7426bffaa17d3160fd2e5e *vignettes/edgerefs.bib
