4b096231d81a3e6c9653d9ea23543f93 *DESCRIPTION
783b7e40cdfb4a1344d15b1f7081af66 *LICENSE
53994c119ec01e42ac8b44b427016f6f *NAMESPACE
cb45562e1a91e7170d06963d4531c0d3 *NEWS.md
1c0ff992e3d52cbeb525f5fe7a519dca *R/class_definitions.R
d2ef2a14eb9fdd3a032e114d24cf436d *R/convenience_fxns.R
0a6e8254a57330598a6765865fc6e7c7 *R/data.R
e8f97ff88dcd8c72dcf665c5ec38faca *R/differential_fxns.R
08bc8b97a66595baa1aed21b3e5f6048 *R/import_fxns.R
998fcbcd54156f8c416a1d0e349520a8 *R/plot_fxns.R
72298109e1bcbd3d9367d226bfae8f2c *R/processing_fxns.R
5d6c32c3ba3387bfb54d964dceb9a556 *R/sysdata.rda
c92b361f9de4f9038c0c37e477800084 *R/utils.R
0fce68edeede479c0ace245d20693158 *README.md
a37b21443636df04aa773cfc95fbda41 *build/vignette.rds
27150518ba128013fb94b4a83b0cd491 *data/CellPhoneDB.RData
6fe342a4cb1aed9758fa29a0dd451fd1 *data/PBMC.RData
bcb96f47a76e5e5cd213f10c4878c208 *data/SCENIC.RData
05335011b6fea60b6a0b129e0a3a65b8 *inst/CITATION
3c09968318faed0ade18d13600b2b487 *inst/doc/dominoSignal.R
53c066c0744ac0524ddaebc7e03ab34f *inst/doc/dominoSignal.Rmd
c7f05dc0cc57536e0d22bbca8f763363 *inst/doc/dominoSignal.html
210f4eb98c292d5d408325601fda242d *inst/doc/domino_object_vignette.R
259f4df7730305e71a0ad473195a15af *inst/doc/domino_object_vignette.Rmd
bd0c8b388a28054bf73fc6b3131702cd *inst/doc/domino_object_vignette.html
3f5b6a5a5bb21eb50c543acef0f21ecb *inst/doc/plotting_vignette.R
e102f4a6073f37e3d3ba497ba0a557de *inst/doc/plotting_vignette.Rmd
079fd84e2662beff962a1b81914c9e26 *inst/doc/plotting_vignette.html
807e99fe0dd63cfb2f2c1604612ed47f *man/CellPhoneDB.Rd
a488e419c1a259b3e77a06a6d400022d *man/PBMC.Rd
9b7fe9c72e3157cbcfc37ec10953f008 *man/SCENIC.Rd
052dec2f9997035b50fd89eb09dde1cc *man/add_rl_column.Rd
393c704605ed2e67c2580a2b381156ff *man/avg_exp_for_complexes.Rd
8812787861b0f136dc06ccf8340e1db9 *man/build_domino.Rd
51fdd1bb56c7031970a7ce1a233bc1a7 *man/check_arg.Rd
77985322f2d31506d7cf2a9675c430d7 *man/circos_ligand_receptor.Rd
fb041fb59b994ced1c524fcb4c0a1c25 *man/conv_py_bools.Rd
6d0d5ca6296a26ecd58aa8e243f5ae79 *man/convert_genes.Rd
a0bbd49de1c334327efb50d87786ab2f *man/cor_heatmap.Rd
5ba7ccd5bbfcefade0e371ae50913a65 *man/cor_scatter.Rd
02f228a87c1cc3785df5cec07c9ef6b4 *man/count_linkage.Rd
a1f74e1281ffbe136b51e145dddba91c *man/create_domino.Rd
f6a52a3d9102781f0438d7ebbe00f306 *man/create_regulon_list_scenic.Rd
2d6af6f92e55e8e360c766af06190b78 *man/create_rl_map_cellphonedb.Rd
c86686305fd840a295f6f6341667b590 *man/do_norm.Rd
91c8315625a46e30040a3cbcf5d88a9d *man/dom_clusters.Rd
d5e14d9b53cfafb2823d2eb5f500b243 *man/dom_correlations.Rd
3414239fa2a4f5056c8ffe5255217fd1 *man/dom_counts.Rd
189110a3a671184990da8d7319acd67a *man/dom_database.Rd
22166d0b7fb24e5bc4bd058964892b97 *man/dom_de.Rd
13f0d67c24edfcb0b53667d737cbc2c7 *man/dom_info.Rd
378aa3c2cb1a912d6f7be5ddaad51a52 *man/dom_linkages.Rd
8da3a99ae57acfa83030ba8d048a8d4a *man/dom_network_items.Rd
d15ef7f7d5c50d2909e9e7e0e962efda *man/dom_signaling.Rd
700ec9c1efed404eb31b9613db5bac4e *man/dom_tf_activation.Rd
6b98fb5d6f888ecb90e8e0835c7da8d0 *man/dom_zscores.Rd
1317856beada78dc36192982ab63622b *man/domino-class.Rd
e92b944e5c53cdd3d72301f5cb03bc07 *man/feat_heatmap.Rd
de7ee486ecea3efe8ed2b7271fef62e7 *man/figures/logo.svg
90d5bb0c10360c445af2f3aa0bcd679b *man/gene_network.Rd
87a56758a654e70d8319dc8c768715b1 *man/ggplot_col_gen.Rd
f28b874b46d15a296364ccd8f3180eca *man/incoming_signaling_heatmap.Rd
ca83500bc2e542ea95e77d3344373170 *man/lc.Rd
9d93fd8f936a9a7625234542db3719d8 *man/linkage_summary-class.Rd
5d1d68c8a4f0e633eca8beb52d43625d *man/mean_exp_by_cluster.Rd
6d187747d9dfc78898775842d70cddb7 *man/mean_ligand_expression.Rd
6c2144924a42ac0bfb31712568ad45bb *man/mock_linkage_summary.Rd
981bfdd52697b65383d681819344990a *man/obtain_circos_expression.Rd
8f72120a3297de0f7cc489aca3dcea2e *man/plot_differential_linkages.Rd
f7c1fc0c3585a3831add850653f51115 *man/print-domino-method.Rd
c9928dabf3adfe9e0a66da45e10726cb *man/read_if_char.Rd
00ca2243fb5b45c41f9e325c6e111e1c *man/rename_clusters.Rd
c4ab72741e7c605d32e3d746aaa36bc8 *man/render_circos_ligand_receptor.Rd
f9b0dbab03ea39ecbcfb53b32153ed67 *man/resolve_complexes.Rd
57b9aa5f8387862fdc23dada9d5cb8e0 *man/resolve_names.Rd
876f84666afa333c7eda83b5ba92c8bf *man/show-domino-method.Rd
dd185e7f2f8075414236f93534299a98 *man/signaling_heatmap.Rd
88b91f9d23ad22bb69a579736a4977d8 *man/signaling_network.Rd
1f407e67d8402b8eb1073fb80d263faa *man/summarize_linkages.Rd
7ca8ca78110b722d85ccec777c5cb566 *man/table_convert_genes.Rd
606c3bc8ff1d1d799a9f89e1a03a4d9a *man/test_differential_linkages.Rd
4b05d7e20f1e3f83944aee2a0d93d71b *tests/testthat.R
a4cab9890927c1fee2272d76d99aefda *tests/testthat/test-circos.R
d2bc41a9a1ba0f293062786b0bee6019 *tests/testthat/test-convenience_fxns.R
13a41b9c0ef8cd08f61826069ab30b72 *tests/testthat/test-import_fxns.R
d80b4db19e4747b02ddb381c7adf0f52 *tests/testthat/test-regression.R
1e902f2afba562b6baf7c6adaa7aa304 *tests/testthat/test-utils.R
53c066c0744ac0524ddaebc7e03ab34f *vignettes/dominoSignal.Rmd
259f4df7730305e71a0ad473195a15af *vignettes/domino_object_vignette.Rmd
e102f4a6073f37e3d3ba497ba0a557de *vignettes/plotting_vignette.Rmd
