41d3b5d049eb88d24f2fe18603d0fb83 *DESCRIPTION
7167fc119c1c17f2210b8ca27baa0dbb *NAMESPACE
83dc2778a776c081c3d26e1c87ca566b *R/DEU_wrappers.R
4dcfd36915a8ab5f52f9c0a8fc271c2c *R/countFeatures.R
c54a5cd1dc14eafe2c8f4be388a2367e *R/data.R
b6381e693430a317130d5be5f1ca63b9 *R/diffSplice2.R
3c5737970158e8dfbae4a9397995246c *R/geneLevel.R
da5251ac6649c0d43ae3dc8251f78a22 *R/misc.R
e2883bb3ca67964a2d979aa92ba7c408 *R/plot.R
3b9dd3e03a72da59a988c551c5dc8148 *R/prepareBins.R
68240162d94db72655a31a282cf7fea2 *README.md
7e966c2c4b3f25e16daee24552bed3ef *build/vignette.rds
25f88686584a8506891404e1247d95df *data/example_bin_se.RData
85ccf5e9d10ab1087d16aef8b1d91b8e *data/example_gene_annotation.RData
4ccb86a93cf2cfeb929d797f37d939c9 *data/rn6_PAS.RData
be176db2dcb1aa37fb8bf0539660b19c *inst/CITATION
dbdcf8254e9be1f881dd021b8b2c1d87 *inst/NEWS
a5ec9f96be60955c99d606d0831a04d2 *inst/doc/diffSplice2.R
e4a60e5b77846ef697000358d92705f6 *inst/doc/diffSplice2.Rmd
dbd20b96e204dc142084a6cd52c19176 *inst/doc/diffSplice2.html
47890e280c929235541f59e13953688e *inst/doc/diffUTR.R
2a1a7b57527ebd98e45b687a89f9d552 *inst/doc/diffUTR.Rmd
d545bbb39a9d3db7a38e3bae882110cb *inst/doc/diffUTR.html
776c994bf6d81b0e4b734668573c7795 *inst/docs/benchmark.png
105bc89e79c79f1529cb563de2b5813b *inst/docs/figure1.svg
504fa8acea72471d0629bd883307427e *inst/extdata/example1.bam
8c3c41aa900b89999bdcd4f47f53a318 *man/DEUwrappers.Rd
e642cfb9c3434b3651916c26456fe0b7 *man/addNormalizedAssays.Rd
1e582b6770301f17fb7f75a5d86de3ca *man/countFeatures.Rd
1b64789c24d20dcbbf99ab48770d565b *man/deuBinPlot.Rd
7deb595eab206768db8673cefd445541 *man/diffSplice2.Rd
7d1cfb5bc97ad0ad7cd6f5005bb7fcb7 *man/example_bin_se.Rd
8308e234c9ff77de73c5de58ac82b8a0 *man/example_gene_annotation.Rd
2c56cf48afe51187e0643790e414e707 *man/geneBinHeatmap.Rd
06d0c45edd64be7cee18486fd73841ef *man/geneLevelStats.Rd
d5112186696d1ed32c35b435940bb20c *man/plotTopGenes.Rd
cb6ea1c332dd65e78afa2fb016d48306 *man/prepareBins.Rd
c9a68cb2d6cd95cc48e63669c885143a *man/rn6_PAS.Rd
bf22fa1b07c018577a9383351e386ea8 *man/simesAggregation.Rd
e4a60e5b77846ef697000358d92705f6 *vignettes/diffSplice2.Rmd
49f06d385d05c736c10ab8fb5aadd8c7 *vignettes/diffSplice2.png
2a1a7b57527ebd98e45b687a89f9d552 *vignettes/diffUTR.Rmd
