26e87ae0d9eaa01666bc555d9a36d0a0 *DESCRIPTION
b7fe8c089f32be3841162a9c09b5c5ce *NAMESPACE
efb550198395f0ee47c16d0110997daa *NEWS
451cc00f44c7758c28fb01a2d385a54d *R/consensusSeekeR.R
88861f3866472e4410f939314311b7b0 *R/findConsensusPeakRegions.R
c54a44e1d5e04a78d5fdd79347bcbbd4 *R/findConsensusPeakRegionsIntern.R
f5ce82f3874b7baee8776cc4f46c7aaa *R/readNarrowPeak.R
a98d01865ff242fc85a8689994cdc286 *README.md
0d9a916dc4a9d8f1393859e54ea2c5af *build/vignette.rds
b9d82003e3e18f8a2a8a82ccba964d94 *data/A549_CTCF_MYJ_NarrowPeaks_partial.RData
ece0a358b9eec87c8f33b85b3077078c *data/A549_CTCF_MYJ_Peaks_partial.RData
93f91451bd75e9e2e2f3e7e4c00d3a0a *data/A549_CTCF_MYN_NarrowPeaks_partial.RData
3bcd528cd8413d7b2c38c144b797c4f3 *data/A549_CTCF_MYN_Peaks_partial.RData
7c382863ff29fe688be908c69d1e6493 *data/A549_FOSL2_01_NarrowPeaks_partial.RData
fbbb80f247fcc4f041c314e67f608ddd *data/A549_FOSL2_01_Peaks_partial.RData
a0f3346f3052e507399c76dd8ed6dd6b *data/A549_FOXA1_01_NarrowPeaks_partial.RData
35f466ba77573a8f87ce235d7ce32930 *data/A549_FOXA1_01_Peaks_partial.RData
6bd9579d7aeffdd5b889ce1ea5297c9c *data/A549_NR3C1_CFQ_NarrowPeaks_partial.RData
a2ba4567d0d837fc327a0b18d1332efd *data/A549_NR3C1_CFQ_Peaks_partial.RData
168268ee8e2b0460c1ae4e497d99b3db *data/A549_NR3C1_CFR_NarrowPeaks_partial.RData
742202819d926361b185cc78680a3e06 *data/A549_NR3C1_CFR_Peaks_partial.RData
93ff4c6fb1c6ece21e25dffab40dd5fc *data/A549_NR3C1_CFS_NarrowPeaks_partial.RData
af737a28119ccf80924bb43e94c797d6 *data/A549_NR3C1_CFS_Peaks_partial.RData
b4584ed241a1349529b44624df42b2e2 *data/NOrMAL_nucleosome_positions.RData
b9183146d2eee23423f5ef931a1b5030 *data/NOrMAL_nucleosome_ranges.RData
ebad7ae99b895a613b6c4cfd6df2d134 *data/NucPosSimulator_nucleosome_positions.RData
67756ce72520c4736f803ec9419c2449 *data/NucPosSimulator_nucleosome_ranges.RData
f4ec68c86ee01575eca6a0607ec7dc84 *data/PING_nucleosome_positions.RData
34795de154967cbf3fc25173783a0b05 *data/PING_nucleosome_ranges.RData
abf1ff75615e1d148d62fae984a8f957 *inst/CITATION
d114554a9b873e11e72f775a7ea124f8 *inst/doc/consensusSeekeR.R
d0b3ff7ae254c7a3b96a5da0a3ced541 *inst/doc/consensusSeekeR.Rmd
3a5dc62d7351aef89a14ed9bac6541b7 *inst/doc/consensusSeekeR.html
80c9401875741422102c96068772c523 *inst/extdata/A549_FOSL2_ENCSR000BQO_MZW_part_chr_1_and_12.narrowPeak
2c63266529b2851dcc7feb67a485f39c *inst/extdata/Hosa_A549_FOSL2_ENCSR000BQO_MZT_peaks_part_chr1_and_12.narrowPeak
802969436dac602f79f4c4a874a4d023 *inst/extdata/Hosa_A549_FOSL2_ENCSR000BQO_MZW_peaks_part_chr1_and_12.narrowPeak
f4627b611c69f0401b0e0b175e475881 *inst/unitTests/Makefile.R
71aefb7070f532ecc0c9a60514959bea *inst/unitTests/test_findConsensusPeakRegions.R
f82f152166de67c72e4875fa3f29bc5d *inst/unitTests/test_findConsensusPeakRegionsIntern.R
bb754bb9b53bc8e32d3cecbe7a61d1bd *inst/unitTests/test_readNarrowPeak.R
a45ca70452d2e50638bf9427f05f888f *man/A549_CTCF_MYJ_NarrowPeaks_partial.Rd
4e1ba0da752736ae2609d2d9468c5240 *man/A549_CTCF_MYJ_Peaks_partial.Rd
29ca07c811961e35b19880002a2d48b6 *man/A549_CTCF_MYN_NarrowPeaks_partial.Rd
6a5591163b8e54424f36f74947dba451 *man/A549_CTCF_MYN_Peaks_partial.Rd
f68c604907f1ba7b6aba413a56148d69 *man/A549_FOSL2_01_NarrowPeaks_partial.Rd
d4d44ae22c9261997c6975b48a337d30 *man/A549_FOSL2_01_Peaks_partial.Rd
82cb1caf4dd6df6c261a4ae6cfa3fa9d *man/A549_FOXA1_01_NarrowPeaks_partial.Rd
7b0bba768d73f081f79642c4d1adc8c6 *man/A549_FOXA1_01_Peaks_partial.Rd
c0cca2af44486f710a0dd6391142a52a *man/A549_NR3C1_CFQ_NarrowPeaks_partial.Rd
e0082f43417d723d32f174a6771d8ceb *man/A549_NR3C1_CFQ_Peaks_partial.Rd
fe7aaed6c4e063aa5c10f639b22056d4 *man/A549_NR3C1_CFR_NarrowPeaks_partial.Rd
aa6efbe109835232956649a5293c60be *man/A549_NR3C1_CFR_Peaks_partial.Rd
9b143f9c038cbc0c2a4a037fe3a74c00 *man/A549_NR3C1_CFS_NarrowPeaks_partial.Rd
99dce744790b1afa9f3e5cf946291447 *man/A549_NR3C1_CFS_Peaks_partial.Rd
b7d641056047beca27bbbee163f228f7 *man/NOrMAL_nucleosome_positions.Rd
dadbb2f5b0170624e4f1b9ba0ca89a7c *man/NOrMAL_nucleosome_ranges.Rd
ea79ccf36bda188a62c055bc4368c9f3 *man/NucPosSimulator_nucleosome_positions.Rd
c4969afb728ec33de0e1255b42eb6782 *man/NucPosSimulator_nucleosome_ranges.Rd
df8fe79d18ba97d76c9905174f6ee228 *man/PING_nucleosome_positions.Rd
596c0d5ed45a23fa7474d2efadfde202 *man/PING_nucleosome_ranges.Rd
8df0e006062d8a228191399bf21eb88b *man/consensusSeekeR-package.Rd
2aec47fc410eeaa7a2fa4ed3644bbb30 *man/findConsensusPeakRegions.Rd
ea1b83c00a7eeaf86e5e9aa69595663c *man/findConsensusPeakRegionsForOneChrom.Rd
064b662d6ca7d819296a611b83e4ce94 *man/findConsensusPeakRegionsValidation.Rd
8713bf3093dbb99c64a197ba8f48eef9 *man/isInteger.Rd
eb4cf20ff5607a3d0add2e5a8b73f6b0 *man/readNarrowPeakFile.Rd
7ddb28694530830f06e28d7044ecd3e7 *man/refineRegion.Rd
460e54c0022a51192c26daa20f6214f5 *tests/runTests.R
d0b3ff7ae254c7a3b96a5da0a3ced541 *vignettes/consensusSeekeR.Rmd
b3224c11740d3b2a5147b14209a7157d *vignettes/consensusSeekeR.bibtex
687661fed92864c9c7bb3e7a42c16de5 *vignettes/figures/NR3C1_consensus.jpg
90fbb4b3aa10616f8ea9437d1fcdf51a *vignettes/figures/ctcf_consensus.jpg
36f9c976d67e61db6fcbc70c42b74a83 *vignettes/figures/extendNew.jpg
1761a9edb75c4c030cea41e847ab209d *vignettes/figures/nucleosomes.jpg
37f919c62e1880ca83c74afaadcfcae7 *vignettes/figures/peak_and_region.jpg
f467e582ad51fe3a2f6cf28bd4254cef *vignettes/figures/shrink.jpg
8a5830f8b5e0a756b2feb85199856b90 *vignettes/figures/sizeEffect.jpg
