0aec0e7b90d4682f590e36f8115b4576 *DESCRIPTION
8825c44db727c16426d5cbecaf8a521f *NAMESPACE
8e8a81b473a72240026f6bdfdfd443a2 *R/addLink.R
d22165d82948a244de11f14d7248ef45 *R/arrayMult.R
ad9cab8e359c939fb43168cf1922b0ea *R/buildCentMat.R
a0512f8aba60d6645d18bd621f4fc6f5 *R/buildCompMat.R
a3221ba9fb02d5f9a83dd8620e28e49f *R/buildConfMat.R
ed2909904a32324339040248282ea589 *R/buildCovMat.R
2a5e22fce36dcc7d9994d1fbc613d1f2 *R/buildEmptyJac.R
e6805d96fe1c54a9ef390ceab299575c *R/buildMarginalOffset.R
bd0f18c0ed2f257ce8cf510804dc127b *R/buildMu.R
b94036cefa05fe6684c7cc5b33c4690a *R/buildMuMargins.R
c4d7ddd593260d9801da3a90d6a7f141 *R/buildOffsetModel.R
8674465efece65da5112b13e48b26765 *R/checkAlias.R
2aef8c149e1fb07260074be0bfe8d1a7 *R/checkMeanVarTrend.R
4393f9db29cb497a19f3eb7d1d88a8e3 *R/checkMonotonicity.R
19bcbbd7ef0be51c30149417d8d0a9c1 *R/combi.R
9b2341593b12b552634b82fc4a03a9ba *R/convPlot.R
bb22b15278deb7bf21a9b8ec16e68370 *R/data.R
e12a8e140acd0741b0fe49951b03dc97 *R/deriv2LagrangianFeatures.R
a8d4df2d39e838c3ba4991b74adfab0f *R/deriv2LagrangianLatentVars.R
edeb2feee46496e3f0ff70a5fca955da *R/deriv2LagrangianLatentVarsConstr.R
5414a2a7e628c344929c9a663790f2ed *R/derivLagrangianFeatures.R
1cde89671702c44373f7bca98616c74d *R/derivLagrangianLatentVars.R
d6663c013dbc515ed612363a1607a1d9 *R/derivLagrangianLatentVarsConstr.R
74cdc549003d3e9ef38e5965e81012f2 *R/estFeatureParameters.R
78715d9786e712c2c654c1708a717bf2 *R/estIndepModel.R
3e9683389d754585d598b73b860900e8 *R/estLatentVars.R
5f58b1fff39ca922165bdbae35c46d15 *R/estMeanVarTrend.R
a9a084bd97124308e23bdec04c9b300b *R/estOff.R
44e8bbd82cb7813a3655b57ad557081f *R/extractCoords.R
5c50df1b708866104a5c379fe9cf873e *R/extractData.R
d8de1437cac5c9e520c26938319651d6 *R/filterConfounders.R
8ac03ce290425b2100de137fac7c9ae3 *R/getInflLatentVar.R
5edc115889fe39b2ae0b2ae174acf5de *R/gramSchmidtOrth.R
3245265a799489b95cdaa8eae643bb9b *R/indentPlot.R
1b0821ce9d21ff9f7ef52171783d0e2a *R/inflPlot.R
a93d78ba019fb69c48ef3307d6e8d9ca *R/influence.combi.R
502b710139834ce1df7cc06c663d0c7e *R/jacConfounders.R
f898e42c2b2fbde0c8ff7bdc73003472 *R/jacConfoundersComp.R
8b7d8d8ef5d9b3c74bce3c654478a683 *R/jacFeatures.R
3c4e3da75123cf11c0fc819a244319e0 *R/jacLatentVars.R
9f4ccefef9f2cdb17b4330c13e2376ff *R/jacLatentVarsConstr.R
9f39c9224e70452de66445ae47118c8f *R/plot.combi.R
63fb9f9fb730ebf5a365298ad1f78366 *R/polyHorner.R
5f12586c93e085884824d46b74ebf21f *R/predictSpline.R
e1c9e864ca9e2c7eceadd10d0e690051 *R/prepareJacMat.R
73d522ddfc0b19c9a098836aa78ec0b8 *R/prepareJacMatComp.R
c01d067456130bba627ba947e89a61c4 *R/prepareScoreMat.R
5752352073e8fbe81bbee545ca78910d *R/print.combi.R
ef9cc19227aba86d230ab6a896f4c2c5 *R/quasiJacIndep.R
3f4ba96bb4cb058de32b79d8edd3b56c *R/quasiScoreIndep.R
b067c6a205638cfc63fda4fb6edaacd1 *R/rowMultiply.R
0f3d55554ffb8c73241efec50b960ce6 *R/scoreConfounders.R
16e99938e7f0168ee389b4d32025171c *R/scoreConfoundersComp.R
cc56e7a94e53bcfc3ffc6e3d7597df9a *R/scoreFeatureParams.R
1e1a17f1dd68466dc53a97abfeec058b *R/scoreLatentVars.R
2d13202f115ebeafe9f1c365e1d82477 *R/seqM.R
ae4b9b58ec547e1bacae5e3ac1b1483e *R/trimOnConfounders.R
5a0510680143d5081edd9e572035673a *build/vignette.rds
837df3f6fc5361cb9b60f938e2a235f5 *data/Zhang.RData
8a395fffde397b8021ddb3975fe9a301 *inst/CITATION
53a85d9b0a270d237f73c29beb58f229 *inst/NEWS.md
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83b1fc2b619ce3598842b7784ea8e907 *inst/doc/combi.Rmd
88c33b0811bfb5bffa0bc7095c40f8a2 *inst/doc/combi.html
4821298ae28130b25300a833729e85bd *inst/extdata/zhangFits.RData
bb4f72cc013fdb11a3ffadea80f5c144 *inst/scripts/fitScript.R
73b6179ccee879ceaa98ce5cae698f84 *man/addLink.Rd
5630f33133b9b00667f3d9b31cd36650 *man/arrayMult.Rd
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1b66e17e904339d2687568bd8ea56ff2 *man/buildCompMat.Rd
ba9bc99c4d37817be6ea6e83219bfa64 *man/buildConfMat.Rd
a26fb656196cc5bbd86bebfbb17722d4 *man/buildCovMat.Rd
73e6f22429561f2eedefc4886a854734 *man/buildEmptyJac.Rd
2c8914dc9ae44739166c0480b2a6fc22 *man/buildMarginalOffset.Rd
7f27e79249dd983bff7d8b9782149640 *man/buildMu.Rd
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d78b7e850f8cddabb851e2ad08b314fd *man/buildOffsetModel.Rd
ebb7b1a67f9f0264a922788a3ca6c7b5 *man/checkAlias.Rd
f0f54276c3684bb095fa6b6358e2f135 *man/checkMeanVarTrend.Rd
a8f358701f42129022949ac41b261f8b *man/checkMonotonicity.Rd
5e6fffd85a5da81827ec7d95522c3627 *man/combi.Rd
50e6316b94d8cb087c8fc1e28866e123 *man/convPlot.Rd
50e3301b72187b0c5ad56c0b658357d0 *man/deriv2LagrangianFeatures.Rd
0cf973562c059e6a81effb92b099f0da *man/deriv2LagrangianLatentVars.Rd
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7854c98a732ef782bbcd1f7ab081b45f *man/derivLagrangianLatentVarsConstr.Rd
c567c02935d99e1c0ef801547f19a7a7 *man/estFeatureParameters.Rd
165ea5975a47d067e827c96aa70fe8df *man/estIndepModel.Rd
fc6dcfa88bb301a0e1019bc92101bdac *man/estLatentVars.Rd
fcd9a13ba94c3a59ccc8dacf3169b562 *man/estMeanVarTrend.Rd
899178d3cdc495114399881103e5450d *man/estOff.Rd
d867d3c816d142ec31d0e57b169bc5a7 *man/extractCoords.Rd
bb8949ea35d146b5a001a0757f6a831d *man/extractData.Rd
5684cc463f9ea1f6a0a4e93f28a461b0 *man/extractMat.Rd
3237b74dd4b1611722be2bc931fb1a9b *man/filterConfounders.Rd
9f5e807199c23d757b8560581dfbfa4c *man/getInflLatentVar.Rd
9aedadc8baae8bc04db4a42293e469a1 *man/gramSchmidtOrth.Rd
ac38ce4a5970b25e624d07b718a7bfda *man/indentPlot.Rd
797710bd5e8b9d6cf9fe15967849eaf9 *man/inflPlot.Rd
e40caa9ca4cab3bd72391854add28109 *man/influence.combi.Rd
ba3e8dbc524c8113d97e5b265b020292 *man/jacConfounders.Rd
9b832ed7a57e182be8005ce7c25e1f68 *man/jacConfoundersComp.Rd
cfb7041075884dfabcff62ef11dd0de7 *man/jacFeatures.Rd
57a48a3ca6ce6f6911c7a4f110acab96 *man/jacLatentVars.Rd
a29adf80d44bb26ec190beeb595ce252 *man/jacLatentVarsConstr.Rd
de78f6c30727c0bb9a2622a73c06e9bd *man/plot.combi.Rd
b2368a7693f2ef4e775fb89ec8efb069 *man/polyHorner.Rd
c61e81144bf1f58464885e827a075621 *man/predictSpline.Rd
5f93c176a154c8864cf6531202551765 *man/prepareJacMat.Rd
41f396f482cd3d1cdb0c2a1343f68728 *man/prepareJacMatComp.Rd
17ba08bef9b94c31ff1a714fc65f831c *man/prepareScoreMat.Rd
0a4b8f61faef2b534c6d942e2e4d693c *man/print.combi.Rd
82dbdc8fe89e7401f0adac9ad3742dd0 *man/quasiJacIndep.Rd
cbc20252d357d0634c02163e75baf569 *man/quasiScoreIndep.Rd
78d5777c0203a81e329f5db7fd093dab *man/rowMultiply.Rd
707022b935c25761b20dc8498d71360a *man/scaleCoords.Rd
c3b9952a4a23bab5f59ff1fcd79f4117 *man/scoreConfounders.Rd
7eda45d700ef90ece4660e5cd4c86984 *man/scoreConfoundersComp.Rd
1b785403a82e3198df760b7b2f714ead *man/scoreFeatureParams.Rd
066067d77988090093fca505b74a63d4 *man/scoreLatentVars.Rd
5620b82bf80ef6c981e06b7617d5b8e1 *man/seqM.Rd
90700f1c22ea077c7e2bfbc8eb4e1c3e *man/trimOnConfounders.Rd
f5b245d285b8bb043c8eaab6b835ca0d *man/zhangMetabo.Rd
6c173118f8c2f4da8e769d81761a537c *man/zhangMetavars.Rd
270a0eb3b3a6c04469b5cad3e1e8e56d *man/zhangMicrobio.Rd
4cdc287e22192c93d9cacee07a505785 *tests/testthat.R
314b3d06b33409325a8a148d89321752 *tests/testthat/test-combiinput.R
dfcd6a8d668db24666d5b2e38bf1e179 *tests/testthat/test-rowMultiply.R
d1171d042431b338a31d54c037b47568 *tests/testthat/test-seqM.R
83b1fc2b619ce3598842b7784ea8e907 *vignettes/combi.Rmd
