73f1eb20517c55bf9493b7dd6e480788 *COPYING
e1d7187a7ed6d5bd61e793976a95819c *DESCRIPTION
902f47b07b7e5136b9886dcb12fefd20 *NAMESPACE
c4d97f2f32c2d8f7b427d35780320726 *R/clipper.R
8068ca06179668cd1b688dd5e2faae10 *R/clipperBackbone.R
f0bffa573bd533ac9e3967ab7b3539d0 *R/cliqueHandling.R
72a94a6f155180ee2b0d7becbf589aa5 *R/cliqueMeanTest.R
76d58460e63ad116d23e0718fedadbda *R/cliqueMixedTest.R
0a01a912089486b930e0311a1c73aa5e *R/cliquePairedTest.R
cf2e1b9ab8265e81964a0dae371850a6 *R/cliqueVarianceTest.R
fef60fc7601c4f6a09a8b57ad25891a6 *R/covariance.R
a8d60eb613e982e225256118ea50857f *R/dag-graph.R
991fae9c16f5b66d5c16fb765246e9f5 *R/deleteEdge.R
66118f9bf5cc139708f75c9485f56427 *R/easyClip.R
fcaadd6941a6ce9ecb5d123aac4a7e6a *R/easyLook.R
9bb947247cf86ff1a487ebaf41159c4a *R/getExpression.R
e59b75ae45f782f16872f9b818ff567a *R/getGraphEntryGenes.R
5613c552714d44d823ce21feb6f39987 *R/getJunctionTreePaths.R
ce3b6ff86290ac8158de56745e5245a4 *R/graph-theory.R
38e86dfea783b6899877edbdf726e361 *R/hotePaired.R
378eac0abbb38edf227dec67e39cce6b *R/hotelling4mean.R
928cad33d17b7e3375df62029525b366 *R/hotelling4qpipf.R
d1274bf76b9a9c969ab1b04c7db60493 *R/multiTest.R
bd52d96088bef9d99759ce51a0178dfa *R/pathwayTest.R
5d33dce2c4c216739d75ec2c216c2396 *R/permutation.R
44ac47bbf48a80758f7f609c66775f65 *R/plotInCytoscape.R
364bfb21e70012668bc856b1de60c0bd *R/prunePaths.R
1fbe62a8d35231097c98ca64f1085a40 *R/removeNArows.R
dd523ec351e6312613e89570facc89a1 *R/removeSelfLoops.R
9d5ab72561902124dde2e84f2ea805ad *build/vignette.rds
e866dbc0bb813cb4d29b3fa9788905d6 *inst/doc/clipper.R
ce8867edc598d8bdaed90a7387d382df *inst/doc/clipper.Rnw
4db964e97c2cba02ec9ed90c0cc3450d *inst/doc/clipper.pdf
e09c5a71f498965a408c5126411e7861 *inst/unitTests/test_clipper.R
1b32d974414a6071a2e71f04a37af94f *inst/unitTests/test_cliqueMeanTest.R
17cd54c96ceb079b07fb4cd0fc616df4 *inst/unitTests/test_cliquePairedTest.R
3b5dacbf80e8d88e5470a54da49a5836 *inst/unitTests/test_cliqueVarianceTest.R
5b44038dbd54edafa5952fe7c681bfa3 *inst/unitTests/test_deleteEdge.R
b02907f5f40ce58a335ebe37d08c9dcf *inst/unitTests/test_getGraphEntryGenes.R
edbd4092085756fcef47cacbc0006edd *inst/unitTests/test_getJunctionTreePaths.R
d62517a0ea51bf3170ffb4b090ce1963 *inst/unitTests/test_patQ.R
01e0eaae1d6936451a173dfabbe8494e *inst/unitTests/test_pathQ-paired.R
925a7fafb16e6fa63e8c44c546c8ef92 *inst/unitTests/test_prunePaths.R
15894f5628fc8eb9711cb9aad4d1db18 *man/clipper.Rd
bfcfca5053f58b29c2adac583ce654ed *man/clipperAllRoots.Rd
14d87fc9ede04728c678984576fc12b4 *man/cliqueMeanTest.Rd
1c7b5f77824f590660e58433061149f0 *man/cliqueMixedTest.Rd
282487873f75da6a1ab9d54e025d8f49 *man/cliquePairedTest.Rd
06467be5cbf322b3137c609fa210294e *man/cliqueVarianceTest.Rd
22c55fdf19314d0e959f2418f6809747 *man/deleteEdge.Rd
d015e95cae12f5d2f95faa16bc5d3a6c *man/easyClip.Rd
370502498b4f36fab06027ac34f719b3 *man/easyLook.Rd
96dde28d0d933b463c8bf5be4f916407 *man/getGraphEntryGenes.Rd
f25cd925e8d6a0c427c80600c1ce0bd7 *man/getJunctionTreePaths.Rd
d178b2115c3f792e452352bd5f62e21b *man/nameCliques.Rd
ca412a72ca24cb5f6fab2dfad1b1a7e1 *man/pathwayTest.Rd
024545e65d7fae6bf52031a76952ff40 *man/plotInCytoscape.Rd
6e19bbf54dd686cd8f2b847c129ebdb4 *man/prunePaths.Rd
b11d11f70e00f1deae783564c6c0f1cc *tests/runTests.R
795310a0ea4157ad8d279e2232b89936 *vignettes/Cytoscape.png
ce8867edc598d8bdaed90a7387d382df *vignettes/clipper.Rnw
