fa5fa4bd41eee84277fb57122890a4e5 *DESCRIPTION
d0a2a93b63e9fde9e695ee4d71781750 *NAMESPACE
5335c30ebf78436b2c24de7ee5b90acc *NEWS
b07cba9c2e3160899a664d811e82c6d2 *R/All-functions.R
5d9381f813f2330fe3fd6c17f2b3e618 *R/datasets_doc.R
99b11e258804a956d35adbc596f9e197 *R/zzz.R
e96dabd3675e6b276f088b390d4ffc87 *build/vignette.rds
8f3a5409906b48fe6c7287d25b1040e1 *data/ARNT.metadata.rda
1aba325f16bde927adeee5dea71df600 *data/ARNT.peaks.bed.rda
cd0da7f25dfc1b8c3931b454eb959ef7 *data/ChIPDB.rda
f7a8f91c88302cf15072e455ad255bb5 *data/DnaseHS_db.rda
697e6bba1304a798dc037fccc62119ae *data/Entrez.gene.IDs.rda
8f6e4f7f864df433d154a39f65fe55cb *data/GSEA.result.rda
faf1fb371d79a99ad357f795e0c1d43f *data/Genes.Upreg.rda
6ec6ce4d4c08687a75f5ec26ee173714 *data/MetaData.rda
eebb261c1caacd59adbe68743e3080b3 *data/TF_ranking2.rda
41b931fea17830640941cc953ba91b6e *data/chip_metadata.rda
9c7c1240d129263720db419ae758cc99 *data/datalist
f50c1e035f5bc2ad62c1fd65a8549336 *data/gr.list.rda
12d20801e7eed2d3cf232edb74902d3b *data/hypoxia.rda
2393971ab9420502022e6648274ed756 *data/hypoxia_DESeq.rda
5e53604903c4b05d8f57cfff2a33ab86 *data/log2.FC.rda
67c5ec17472742e166461d4d9a18cb43 *inst/CITATION
e1561f1bdeb0f0202a7dc50af917573c *inst/doc/TFEA.ChIP.R
ded27845c3bff30e65f58dbc056adfbb *inst/doc/TFEA.ChIP.Rmd
32ebd0638c792fc3b3235e67073c031a *inst/doc/TFEA.ChIP.html
cb5ff2b24109c9670a4e4c9ad931aa96 *inst/unitTests/test_TFEA.ChIP.R
84dcb70cf3ecfc1d102c5dd1cba33a35 *man/ARNT.metadata.Rd
fbad2d683c9b82ff65f012599387c102 *man/ARNT.peaks.bed.Rd
2552ca1d271e11c0df5b7ceb430a3386 *man/ChIPDB.Rd
f17133e3b69421b0728de3d05c8c3ee0 *man/DnaseHS_db.Rd
7c4723235a19fc8e2a50aa61c2052531 *man/Entrez.gene.IDs.Rd
c5051886c4d05e738eb16c101d3346b0 *man/GSEA.result.Rd
ede9a6e00e7ad1701c685b7ee37299da *man/GSEA_ESpermutations.Rd
57010bc13008aab542ac6f1ae1c6a28e *man/GSEA_EnrichmentScore.Rd
97ab91bec239a63d558087fb4414184d *man/GSEA_run.Rd
fde16ae2132e7ef119df8584c4a34b22 *man/GeneID2entrez.Rd
17d7300f22778fffbd1ec2b039d97fff *man/Genes.Upreg.Rd
16321d6c905ca793ea786bc83c955900 *man/MetaData.Rd
d17b7b3a3de9f670faa58a9663a27599 *man/Select_genes.Rd
abdcc01ebac8bcb4d3df61bac835e7ca *man/TF_ranking2.Rd
799b427d797d11804a5c033de5f0da65 *man/analysis_from_table.Rd
0e36946bff3ac7154486cfb036689bb4 *man/chip_metadata.Rd
2313e260aba1fe6022ad0cfc01122ea1 *man/contingency_matrix.Rd
92dab9cd8d775bd16288faf9dde561b9 *man/filter_expressed_TFs.Rd
b3377e37a458fadef1b93cf2d492aaf4 *man/getCMstats.Rd
801bac069c4640f324cf0d01f4d929a0 *man/get_chip_index.Rd
9f561cc20f9e8e2dff1a5f3129df155c *man/gr.list.Rd
914f4d1763f56b06c75e5172ef7d6b21 *man/highlight_TF.Rd
78878c933f48e723267977017b3504a7 *man/hypoxia.Rd
733214933ca7176a68a07e7179803e7a *man/hypoxia_DESeq.Rd
5c4c3014eaf29a41b47a03c100d25530 *man/log2.FC.Rd
9c98f18cd68b82bc750e0e3e27eeb489 *man/makeChIPGeneDB.Rd
c8ae3320ec37feb57b0d72298c752931 *man/matrixDB_to_listDB.Rd
5029ae66ac35796f49cf05a0b9b65f1c *man/metaanalysis_fx.Rd
5f52b5c892f8c5ef4544743c6a2ef481 *man/plot_CM.Rd
d29da64155589a3e40fdde8914234d97 *man/plot_ES.Rd
20f74abb575537bd1f8d9e783a256003 *man/plot_RES.Rd
fccf0b6867ebb570a365e54b5802d4a5 *man/preprocessInputData.Rd
5ca694215f1edb86b366d832fc9cc641 *man/rankTFs.Rd
8d6aa144f08524c77bcd2ded4c38bf7b *man/set_user_data.Rd
5196af7108ef6155059d0491b2ea3225 *man/txt2GR.Rd
9aecc4cf4fa14b5cf4ed380997d69f24 *vignettes/CMplot1.png
481c2ba44798a55fc054dfececc73e31 *vignettes/CMplot2.png
321af22526fa3cacdd2aeefd0f5ab896 *vignettes/GSEAplot1.png
b176244b240de29f6f928e953a92915d *vignettes/GSEAplot2.png
ded27845c3bff30e65f58dbc056adfbb *vignettes/TFEA.ChIP.Rmd
c3017b48fe0645a3af68beb0db76bdc1 *vignettes/meta_hif1a.png
7e48614b72c9b5c6ff784c25db18d859 *vignettes/meta_table.png
39054d3a15439c10b0a936daf8a9d572 *vignettes/rankTFplot.png
