8a6a6f48bd35c72ef7ca1d632e951f4b *DESCRIPTION
77ac8a357cb19c2f33b1d4ca7fa85200 *NAMESPACE
bdfffd0a1e4f6f2fab20c50ca77088fd *NEWS
55c5201ba6d333a5c55433d7527cfc5c *R/TEQCreport.R
0ae642bb8981059f26e4147c8e1e1c1d *R/chrom.barplot.R
ae17c3c390d4bac69454aabe5f62e45f *R/coverage.GC.R
89edcdd3bda07ae362e6fa82ee158458 *R/coverage.correlation.R
826e21de0ba0f627696b5e6f8819aad6 *R/coverage.density.R
54a6c6b8fd55b6aa686f6d217e79300f *R/coverage.hist.R
929f65fd46896c651d8ed803c12aad1c *R/coverage.plot.R
b4fcb7fa614396ef9873caaca1311b49 *R/coverage.target.R
abc7f064bdf714ff4f812547ad20dce3 *R/coverage.targetlength.plot.R
3a2341e032bf040908a0b4ae7e3b783c *R/coverage.uniformity.R
4d0123de859e200eb0cf4f8a91c6c0b8 *R/covered.k.R
0cb4996f8e742791468ec3f61a1e8f92 *R/duplicates.barplot.R
bd9825825fefa6e50c204265a0a36fa0 *R/fraction.reads.target.R
dc5cd5db009e54cc6dc769a96262a0f8 *R/fraction.target.R
228dfd24f1e774394b7e83577ac3316d *R/get.baits.R
138d9e25237fdadd0e80f51d24753aa2 *R/get.reads.R
a9ba145b777d2fd14db7295b8b3b8421 *R/get.targets.R
e319416e07debbbb4b19108f150468c0 *R/insert.size.hist.R
07848dfe8ab9bb483aa9896ae1209217 *R/make.wigfiles.R
5484d43cf162d517839ac44a3ef69605 *R/multiTEQCreport.R
0d03e121035df2bdac6da34d824ccbcb *R/myreduce.R
10c3bda0f7a42c3e7206d0f378b4afd5 *R/offsetfun.R
fda07bb2800e4a5d4445443666f7f2aa *R/reads2pairs.R
439128d5cca293b3c9c79594f8dc1ecb *R/readsPerTarget.R
7d4c7cff6181362bc3a4e8745c4ebfab *R/zzz.R
6b8ff2f4f6d3eb9ed1c1b7b2aa24dc0f *build/vignette.rds
42f1f2d59a08d66742a9daf858d73cf4 *inst/CITATION
51d1439227cf8ac38e75ed70bc61f018 *inst/doc/TEQC.R
a3fbe38353bb38b3f67368d43cb6fea3 *inst/doc/TEQC.Rnw
145b66212275f10b5c9bd9c6dec5eb2a *inst/doc/TEQC.pdf
06c963394b6544596dcae385de2f20aa *inst/extdata/ExampleSet_Baits.txt
809160b45848f560078fe202e294fc00 *inst/extdata/ExampleSet_Reads.bed
d0518f5857b2fc8e7e7eed82b64f8c2c *inst/extdata/ExampleSet_Targets.bed
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8a65fa1c59ee4e2e1ed9fdf3ae1752f0 *inst/template/6000-CoverageGC.html
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a60830fe52652eaea47f127d027cfab5 *man/TEQCreport.Rd
c10e86622de97a0d9565cecca17f0893 *man/chrom.barplot.Rd
45756cc42b8233678994e0d85aadb68c *man/coverage.GC.Rd
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dd1b7ff8131eb43659792879c31cc080 *man/coverage.density.Rd
5e65c610e79f355e298199481a7e2202 *man/coverage.hist.Rd
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919e2d6416168f8d7795775f33bda74e *man/coverage.targetlength.plot.Rd
b6f1b25c6c151713583fc03b5ab1849a *man/coverage.uniformity.Rd
684c127f88029da084074585d21a5930 *man/covered.k.Rd
0feea620dcfb1df28254e52c93795520 *man/duplicates.barplot.Rd
458d4da1961b760c72ec0011e8953912 *man/fraction.reads.target.Rd
c61250ed3487efc7e9a3c83c4d5fb791 *man/fraction.target.Rd
301cc4fd5cbe1980aec96f25b621f128 *man/get.baits.Rd
2b3b51c6cd2218f7ae276cdddb9321fd *man/get.reads.Rd
d24061f42dde1fe951f897e1a89c8d11 *man/get.targets.Rd
fdede8550b1680ce480f6472d6a6b040 *man/insert.size.hist.Rd
d75cf078ed21f6016a06d1f4fee8a4dd *man/make.wigfiles.Rd
8e3218274fccdb811b5a60cb6db0ff8f *man/multiTEQCreport.Rd
556d9722abf70753fe500495a4c0445b *man/reads2pairs.Rd
075502f5fdb0e39d7553d3da4d380052 *man/readsPerTarget.Rd
a3fbe38353bb38b3f67368d43cb6fea3 *vignettes/TEQC.Rnw
