1b59e927ba30c3cf10d68370c9e2722e *DESCRIPTION
ba28d972f762a043c6d473be7caa46aa *NAMESPACE
b3be11a18e8eac123907fd7e5c0f4ee1 *R/NGPscData.R
25fa7ef1075661e54c59ceb3991b004e *R/SPsimPerGene.R
dd404e8303b98f40558db67fa856e78f *R/SPsimSeq-package.R
7691259e1e322fa901d7b83a7297d325 *R/SPsimSeq.R
fbdf5d2a51edafbdf8588e07b9ca879a *R/buildXmat.R
8dfcada2b05557ea90e0525179c6752c *R/calculateCPM.R
41e45451a6a0fca7f8a875a9f5deb380 *R/checkInputValidity.R
9d6517100b52b1a1031879fde1d7fed6 *R/chooseCandGenes.R
24ed42248c85256e61b5a3952a192a5e *R/configExperiment.R
f52156105d742138f03c0478150fb601 *R/constructDens.R
0f3685f5371b6a30042ec978e00f392b *R/estLibSizeDistr.R
89d3312942836ff35d6a47445f3587ea *R/evaluateDensities.R
4c4d07d130c1f5f8d9df0bdc447c8aab *R/extractMat.R
c1f49889854676d93f450f959b438e2e *R/fitLLmodel.R
7a74a9098238b627426591ba79e76cec *R/fitPoisGlm.R
f5d157a4988c84cf0da8cc40f0c2a0da *R/fracZeroLogitModel.R
1a541891c91947bef744de570848c4f0 *R/genCopula.R
2aee2d27df80bc5f1132dcddb3693f67 *R/genLibSizes.R
fb5efc2367cb7a19986abbcc3ec2273d *R/geneParmEst.R
dce5dcc8b7a41b4b4830580106c13ec7 *R/matchCopula.R
96d6fcefe37b2fd071ad70a6cfdc7118 *R/obtCorMatsBatch.R
12478392cbc65501caea495a0453eccd *R/obtCount.R
6f797505debb35c6ebb7d65c812a1969 *R/prepareSPsimOutputs.R
736eb088b537955edb9f65a911b07b9c *R/samZeroID.R
d7dc156e099d8fa34243b1c362919f4c *R/selectGenes.R
926f5bdf5f0ad531c1b3002261591935 *R/zeroProbModel.R
b5ad30ccbff03e5478a282f0d51cde90 *R/zhangData.R
e399d034b7d591d08b310bbe8581d4e9 *build/vignette.rds
45fcb42b49024d96463e85db937ff0c7 *data/scNGP.data.rda
25d2d759c10912926f6610f163ee59ed *data/zhang.data.sub.rda
285831236e55a7040426f187023591de *inst/CITATION
ef06612425741a69afef4accd719bea5 *inst/NEWS.Rmd
525f84fcfdfcb46b4ad1e1e0770f1f56 *inst/NEWS.md
1d61b011bff7eaca0aa28a755b0109e9 *inst/doc/SPsimSeq.R
578d80f79b15a18b153c7c67db811e73 *inst/doc/SPsimSeq.Rmd
626ae04ebf850d80989f77976174a1d6 *inst/doc/SPsimSeq.html
39bb43c00a7300cb44ef43822e0520b5 *man/SPsimPerGene.Rd
7e4877ffb63e28798fec67f7f55376ea *man/SPsimSeq-package.Rd
81fc0abc5646569b10592ca7895c31dd *man/SPsimSeq.Rd
021465bfbe976be5a1ac6bb1a975be15 *man/buildXmat.Rd
99346e1bece443eb45194bb384303062 *man/calculateCPM.Rd
786d3462c5dc2b31357a6849f3146cc0 *man/checkInputValidity.Rd
825119a14f1933cf18e3403aaddb152e *man/chooseCandGenes.Rd
a5f1b3f9a7017435387e644fda760efc *man/configExperiment.Rd
a3663fce8c62fb6aa6b37c1346df3558 *man/constructDens.Rd
b9f58d00c623b05deb3e36148dfc4e30 *man/estLibSizeDistr.Rd
73e5baa4f4233bcc2d110e278f167c67 *man/evaluateDensities.Rd
173d406e23acf79b5319e8b2adc960ce *man/expit.Rd
19471d1bf2689f5292142991d740eefc *man/extractMat.Rd
2f873e31e4ae4fe18672d0bae00c52f9 *man/fitLLmodel.Rd
d8b51f5e9253ea648f05fb07e65ec024 *man/fitPoisGlm.Rd
6b13834d5b67e43da2b44305bdd63b66 *man/fracZeroLogitModel.Rd
cb36efb6f406f63eb4d4eae857794857 *man/genCopula.Rd
9fbf766ad4b1eefc39cc3dfd4a7ab07b *man/genLibSizes.Rd
3c157a425dc9ea3e513da5269bc9f5c1 *man/geneParmEst.Rd
f677b061dcb41d3ca25ccc253f38b9ff *man/matchCopula.Rd
322e85865a5094e179cab003d3884b4d *man/obtCorMatsBatch.Rd
6d9648c512597c08a0199bd63f018e2f *man/obtCount.Rd
a85cce29e0b4801a461e910f20930a3c *man/parmEstDensVec.Rd
fbda3dcc628f378ad264e3e68b1616a9 *man/prepareSPsimOutputs.Rd
c6d2e0dcb6458a90d76290381d23f7b8 *man/samZeroID.Rd
3b59752c12f5db5ae3aa837a402b9771 *man/scNGP.data.Rd
e30c8e696d7eff11d8f71c999f5d099a *man/selectGenes.Rd
cdef942231bc4c092dd9ec55a34049c0 *man/zeroProbModel.Rd
ddfc269bbdbec2ca40e08bdb22fffb55 *man/zhang.data.sub.Rd
929f5c3a0b94ca384d5ece6e2e05a190 *tests/testthat.R
35bfa69863fcf9cd553e6d62effa8557 *tests/testthat/test-SPsimSeq-input.R
f7eaeb2f449d188560f8c212021fa806 *tests/testthat/test-SPsimSeq-output.R
9cbd4db77ac28a6680cb2d70a125033b *tests/testthat/test-buildXmat-output.R
c1a98fcb271a0538146e103ee59cbe63 *tests/testthat/test-configExperiment-output.R
83f5f1e4402bbe3cc451584309f4653c *tests/testthat/test-fitPoisGlm-output.R
deb5c6c34c8e641682dc8cc5e89ce012 *tests/testthat/test-selectGenes-output.R
578d80f79b15a18b153c7c67db811e73 *vignettes/SPsimSeq.Rmd
b67d83f939d59ab96d06f763a470cab4 *vignettes/references.bib
