ee73cbf12eb11bd36308bc6e2098b60a *DESCRIPTION
d9205c781c608493c63090e1f4036033 *LICENSE
059269e036e5c4e07dacadaa685a9a7f *NAMESPACE
515e0eaa35d03778298b8ecab29a8647 *R/RcppExports.R
2884b7eabc107b39b3b35b5f49bbdc2c *R/Rfastp-package.R
b70dc7fc2413e9ea4f1231d214f671db *R/wrappers.R
f3d76d311e86769ac5d6d81ef35566ab *R/zzz.R
c9a3df6d6eac7d4bd3717e070fcc1fc5 *build/vignette.rds
85d1b65421743d509ca9e90fcbdeeeb6 *cleanup
ca1d2945f6e8ccf09c0702b3c3661979 *cleanup.win
dfb3ff997cfdea99dc2baa539872a301 *inst/doc/Rfastp.R
a6fcf2f520ec5cfa92284e8eb26d5570 *inst/doc/Rfastp.Rmd
b75cb9ca98f335c7502825e8adf1caea *inst/doc/Rfastp.html
5ae92007ff4b5f0b5c47c77860891dfc *inst/extdata/Fox3_Std_small.fq.gz
af916f1fc940088a40746cb736ebd035 *inst/extdata/ex1_sorted.bam
b60d519dd7a7a61f96b9964e94d0ea23 *inst/extdata/merged_R1.fastq.gz
a7b9c8f701538118b4ebe7449fc651ad *inst/extdata/merged_R2.fastq.gz
6ac8e5f260e7b9b4e6c613b84c444ee3 *inst/extdata/reads1.fastq.gz
4fb22dd42e7d167caf11e8e66d65aacc *inst/extdata/reads2.fastq.gz
a3e4d671b27f0a28734ca92f9b123fde *inst/extdata/reference.fa
bdfc2027700288664ab1fae2b4020c8c *inst/extdata/splited_001_R1.fastq.gz
7de41f2712c269c8996be709769af37d *inst/extdata/splited_001_R2.fastq.gz
94db9af4ed5a6ea3df17c0a99298debb *inst/extdata/splited_002_R1.fastq.gz
ce866e3599b4fdb7f9056cd340962aea *inst/extdata/splited_002_R2.fastq.gz
c75fa8e794667e7bf08a8c89d93567db *inst/extdata/splited_003_R1.fastq.gz
1c249ad785442f64758996e4879e2ef4 *inst/extdata/splited_003_R2.fastq.gz
ac8984471a151936f35516b071b4841f *inst/extdata/splited_004_R1.fastq.gz
59cc98211e841b2f6b537bfa538c50ed *inst/extdata/splited_004_R2.fastq.gz
ce26b8367acf7b0040b76b9d81a07483 *man/catfastq.Rd
a2f01e7719c4ddf225393413bf08d881 *man/curvePlot.Rd
7f54f045a0cef3dc3404c0c4507096c0 *man/qcSummary.Rd
7421ede84b291f8c3816f6bac43196eb *man/rfastp.Rd
85b80b59e415a9e58cea7112f81693c2 *man/trimSummary.Rd
7037dc21b0e786000f5406a0d9b57877 *src/FASTP/LICENSE
aec24dcc756fe7a640b71c97a96823e5 *src/FASTP/adaptertrimmer.cpp
13ef3ca1278a7ff2c7982b85d3904c44 *src/FASTP/adaptertrimmer.h
32b3811d887c5df21514e4f9eb5fea2f *src/FASTP/basecorrector.cpp
97cbc5cd5500c9bc3d53d64bb6066b44 *src/FASTP/basecorrector.h
7acca216da659823e7e5269efdf04e01 *src/FASTP/cmdline.h
4213389208fce42237717a27edf15c19 *src/FASTP/common.h
fdfa060a16a7d81238bbba3355f43f46 *src/FASTP/duplicate.cpp
55706d3ceaaadae5537675fe27124e27 *src/FASTP/duplicate.h
1287cc27a2b14a397766a57d078f7bd5 *src/FASTP/evaluator.cpp
55a8c480f702897d1b6517a829e22f9b *src/FASTP/evaluator.h
96db4aca2ea1b8ab24e782938f1c2e45 *src/FASTP/fastareader.cpp
afad3f9735b23624024da5820725ae63 *src/FASTP/fastareader.h
9964940e470259f39c897adde953cf3e *src/FASTP/fastqreader.cpp
be5c90623b7a82d59323c4f9eaa59a7f *src/FASTP/fastqreader.h
cd61d397ec17daa6dd6c53add1a1de5d *src/FASTP/filter.cpp
73e9460f1dda9611f41132984ebf4c00 *src/FASTP/filter.h
26fea14daaba8a8332f30e5c1b0cd8e8 *src/FASTP/filterresult.cpp
7ac34d1113232241f541b3ac5e832095 *src/FASTP/filterresult.h
388efba98dc677376733363eb2591993 *src/FASTP/htmlreporter.cpp
eb38f47747d57c101d7e421ea17e39b7 *src/FASTP/htmlreporter.h
7cc9a606c0bc82e1e1e0da41f1d2927d *src/FASTP/jsonreporter.cpp
c1e029eb76fcf476fdb21aa40ea84ed7 *src/FASTP/jsonreporter.h
ef87b18052d149de223e704588010038 *src/FASTP/knownadapters.h
35e5c5b2b17257d5c9d67dfcf3f70f93 *src/FASTP/nucleotidetree.cpp
4d9a8496eccbed11c23127c9f2a86540 *src/FASTP/nucleotidetree.h
04206a33cdd9f676866f5ee6ce8e7b90 *src/FASTP/options.cpp
77f74558d9327b02668e9248a80645a8 *src/FASTP/options.h
7321c85d592710f4b5bcce3e68dc835e *src/FASTP/overlapanalysis.cpp
60544ad48f3261dd7a2d530f72a6535b *src/FASTP/overlapanalysis.h
e65533e2863726b4fd43e676321eea03 *src/FASTP/peprocessor.cpp
4a3a1cff9f2c49fb4d009784b7a944f2 *src/FASTP/peprocessor.h
bdf08f2ad0a2db7d60f249c4fae1271c *src/FASTP/polyx.cpp
f07d616c299d9afdb3cc5265eb4d085f *src/FASTP/polyx.h
04b558ce65843260f1905209774548bb *src/FASTP/processor.cpp
bf71848e66020f131a27319970a69071 *src/FASTP/processor.h
8cebd7f50bd4cbcd1ca0af665c9ee2d4 *src/FASTP/read.cpp
91e8eb1f5db9ff9119b65e83bd278b52 *src/FASTP/read.h
97a3662e7562ab0b469cd0397998e125 *src/FASTP/seprocessor.cpp
e988ec2dcb112b97466c2994e1f5c3bd *src/FASTP/seprocessor.h
193e2dd6d096dd601bf4c0b8441d0544 *src/FASTP/sequence.cpp
4bd19e63933280254d016393ffce83c6 *src/FASTP/sequence.h
ea0f6829f3c7ed46176001d0bbf87e8a *src/FASTP/stats.cpp
5062dfc61760384a8df883ad625b92d2 *src/FASTP/stats.h
f24b6ae1cc1f1c76d0bee618027bd953 *src/FASTP/threadconfig.cpp
ff421da3bae2eef45f5b34d635288a32 *src/FASTP/threadconfig.h
2c6143a7b7e19bc7bf4d0a3a720678e2 *src/FASTP/umiprocessor.cpp
758e8c791a7a904daec60310bda17288 *src/FASTP/umiprocessor.h
56c9cc74bc6c03e7d67c6c4ef463b7cd *src/FASTP/unittest.cpp
93c4612d4a881abb5d95a3c653648737 *src/FASTP/unittest.h
b84ddbcad44e58cc2ea3c7b3cbbdb26b *src/FASTP/util.h
9c228a181af2a9e590120e2aae3204ea *src/FASTP/writer.cpp
95e5a63897a4a8c70c894b92cede9314 *src/FASTP/writer.h
45a983fa8e71d14a450cc64771859bff *src/FASTP/writerthread.cpp
f2fff01e19b56a05a9037f4d6028ff91 *src/FASTP/writerthread.h
f28d16b67efecdfafa0d816a7d982124 *src/FASTP/zlib/crc32.h
7ceae74a13201f14c91623116af169c3 *src/FASTP/zlib/deflate.h
b337a2af7b4c7af157b1b2a9dd64c0f8 *src/FASTP/zlib/gzguts.h
f3669099d3f571dbc0426401ed5f50e3 *src/FASTP/zlib/inffast.h
7fa3e91804601b6618c915b76a8dc332 *src/FASTP/zlib/inffixed.h
8f1b05cdf36a269882a955071b140162 *src/FASTP/zlib/inflate.h
ec87be89b9bcca8ced80a70f857e823b *src/FASTP/zlib/inftrees.h
51fdcb3e2ccf60ca13c06920c89296a3 *src/FASTP/zlib/trees.h
0af2d6af45fd78e4f288583333978cce *src/FASTP/zlib/zconf.h
64d8a5180bd54ff5452886e4cbb21e14 *src/FASTP/zlib/zlib.h
04fcfbb961591c9452c4d0fd1525ffdf *src/FASTP/zlib/zutil.h
6d9d969062c113387c5e3e32025ecb4d *src/Makevars
e2d79f21faeed9f44f98174ec4507a89 *src/Makevars.win
182148d2d25c062d7923b3e5bad91d75 *src/RcppExports.cpp
4224d32e04e2440c7e463adb33310855 *src/main_fastp.cpp
1f02feb4863a06d6678781c9355dc6b5 *tests/testthat.R
fa8e69019a344221719a048bfa516929 *tests/testthat/test_rfastp.R
a6fcf2f520ec5cfa92284e8eb26d5570 *vignettes/Rfastp.Rmd
6731913a7b42fb49bb669604912e5172 *vignettes/fastp.bib
