a5a81b151bf43792f89d350dc837251b *DESCRIPTION
86d3f3a95c324c9479bd8986968f4327 *LICENSE
3b22800b739c0371117f94f976177ab1 *NAMESPACE
f509fce5f1b65b845784654306b68a5a *R/associations.estimation.R
c0aff240de0f471c897ed5278ad1a052 *R/associations.prognosis.R
2e1a16ca91af9d7ce4b040a29cea9c81 *R/data.R
5251f31c217cb8a37cd0915287bdcf24 *R/data.import.R
f8ff12b076406673ec7710e5545244ec *R/mutational.signatures.discovery.R
0208cbea525884549834dde11993f169 *R/mutational.signatures.significance.R
28ba86666fa6e3ab60c40ac40cbbe9cf *R/signatures.clustering.R
02920576c0dfbe09d5c6a4783aeaedc4 *R/utils.R
952b31f19d560625286c6bb2b7d54737 *R/visualization.R
0ddf6d20144a74b57e1d832145e5ce49 *build/vignette.rds
5569bff3aa302ca79daa7804d33af920 *data/association_mutations.RData
dcfee890d063095cac3e27d53bee5116 *data/association_survival.RData
1754403b81bd567ff48b36e15fb4a097 *data/background.RData
377d94abcbea32bf792beac6d6c60487 *data/background2.RData
08f94fd35dabb0b65d6a034dfff2bcfe *data/cn_example_reduced.RData
52eb2ff27b813c0b57185b704179233b *data/id_example_reduced.RData
d6fc8d907a2ae8694f36a7aa0754ecff *data/patients.RData
9ad715e167559632108086c684915dee *data/plot_data_examples.RData
827c891bc5cf321d99de67074ccaedab *data/sbs_assignments.RData
541f08d1ffc931d4da67252320200d1d *data/ssm560_reduced.RData
b88b01bf5fb78d0c53f4c01d6db0bc8e *inst/NEWS.Rd
93d0ff349cfd602fc0f0a69083d06d73 *inst/doc/RESOLVE.R
aedcaf78b8e7b330a103155639401013 *inst/doc/RESOLVE.html
fb843975e0de4b74d4a154a11ba721f0 *inst/doc/RESOLVE.rmd
428ea25e2d4995a4d5e6bba4d7b3130d *man/associationAlterations.Rd
358fcb47e4c566d8ac77e1b3a877ab92 *man/associationPrognosis.Rd
dca0d52abeb04736506c9ee08aa920da *man/associationSignatures.Rd
6fd6421f6bbb144ba94178687d54e15c *man/association_mutations.Rd
8ef10e570d1cdea773c27380ebd9bf50 *man/association_survival.Rd
262ad5aa86eb8c789a2ea376d7f28915 *man/background.Rd
ce10dafa094c281ac4bafceedc8bb78e *man/background2.Rd
c2eae4bab001aac70b6f8dfb566f36fe *man/cn_example_reduced.Rd
c423ab5544614f432304a7818a0e748d *man/getCNCounts.Rd
577b4fa75dca6936668b34b05afb5e6c *man/getIDCounts.Rd
04d4ceefa89b46bc73e9ea640f0f860c *man/getMNVCounts.Rd
829f7d2b11296212d880ee6447c98417 *man/getSBSCounts.Rd
980a4ebce81f7276a9217764a5b9d9b5 *man/groupsCNPlot.Rd
00551d4e5ca06e0ee18c737ae676870f *man/groupsCXPlot.Rd
a7ead2e94db30c8da93c8655b12c54a1 *man/groupsIDPlot.Rd
e321f53cb31dd997ae8881b53d3d5482 *man/groupsMNVPlot.Rd
1a78072ff5bbc683b243c2c71c329f7f *man/groupsSBSPlot.Rd
53bdadf1a9aa6015ad363c6a879c3b92 *man/id_example_reduced.Rd
eef79b96c7861fa00670ba1f58f19d96 *man/patients.Rd
6065de2f0c1b9f06a90b9ea91f9a515b *man/patientsCNPlot.Rd
12b039d914a32b97365e5b4693365d8c *man/patientsCXPlot.Rd
f361bd766f8f3527b2c97dd9e8f4ace9 *man/patientsIDPlot.Rd
9ae968c02ff9095c3ee3c519deae4a4b *man/patientsMNVPlot.Rd
f61a382157bf5f06448427dcc02110ae *man/patientsSBSPlot.Rd
2d5488f16672fdd8edafa4c7e28c2d43 *man/plot_data_examples.Rd
e8832b6c42663cbd34e3257ecd929d31 *man/sbs_assignments.Rd
c04c16d5aa7b4617cd467c773429d407 *man/signaturesAssignment.Rd
002faa957ef09536922a37b7a5e74e75 *man/signaturesCNPlot.Rd
7a5eb711a5a3b0004aa2697eafdf095c *man/signaturesCV.Rd
9ae55d71637ead0a5628b45a71398fba *man/signaturesCXPlot.Rd
3a532977d5ca220fd55f76ebeefa739e *man/signaturesClustering.Rd
a9018d8f48aff48e08cee23f17c06186 *man/signaturesDecomposition.Rd
3bfdd626ac71d1e4b74669ce2281b7fb *man/signaturesIDPlot.Rd
66bd47072f5e1fc9bf645818b0d9b52b *man/signaturesMNVPlot.Rd
c44a18bacc794a5030c392a1c4f53c3b *man/signaturesSBSPlot.Rd
f2358755f3d8cd5437c0fd2bb28eb0aa *man/signaturesSignificance.Rd
6c85a0aacdc0d06fdd2c78f321bc1c0d *man/ssm560_reduced.Rd
e40efd687e4583a7eda3a0388fd427c2 *tests/testthat.R
4a5daa19017e1bc6f5afed19113efc19 *tests/testthat/test_data_import.R
ab8c12bc3af38eefbc51e9421c78fdeb *tests/testthat/test_signatures_analysis.R
fb843975e0de4b74d4a154a11ba721f0 *vignettes/RESOLVE.rmd
