73ffe76b3dddaaa7b8a7371641f9ec77 *DESCRIPTION
84a8f5437854a26ff12daa85145f3489 *NAMESPACE
f9be0ea96e4af363cebc5d27f4c09b3a *R/AggLimmaWorkflow.R
693c5fc42db916a8864631a213626c9d *R/AggPeps.R
42802409b31aeed216f268a2e74cbb0f *R/CompPepSetTest.R
edcd9f3869f4abb7590afc20a5dddb2b *R/CompPepSetTestWorkflow.R
44ed7271f26fcbc152f3f11cb6780fcb *R/EnframeContrastsRes.R
9252ad4302c7eeb478a7ad02b64f7755 *R/EstimInterPepCor.R
fc73e2eae6df1e098e8c089c6b732729 *R/FitContrasts.R
3c8f2327cb3e20dc88c196e23091b0b3 *R/FitLmerBySample.R
df6cc46bc7fae1a55b713f3d5065b35a *R/PepSetTest-package.R
02aad9516d7542c862ce9e7873ba4468 *R/RobustReg.R
6238d9da3c289e51cbead41e66f5b8ef *R/SelfContPepSetTestWorkflow.R
6d1d27cb2522ce3408e9277e28b56526 *R/TTestwCor.R
e4d6aabe0f92eacd97f39288fb472d5f *README.md
fe4c42b676863e8fef6a997130e07f63 *build/vignette.rds
8cb545b795e69ec6f2cc7f39b16c9a3f *inst/REFERENCES.bib
892d734142adbec16756acf2a29d7528 *inst/breast_cancer/breast_cancer_calc_corr_train.R
8e227088647ddfcde93c70ce282b337d *inst/breast_cancer/breast_cancer_calc_corr_val.R
5ba47fbd7b2db4b3ca566ea8f77a0b35 *inst/breast_cancer/breast_cancer_dea_train.R
76b0de345777e0eb01d446abb185cfcd *inst/breast_cancer/breast_cancer_dea_val.R
821f8c342bd15b48ed974b3875eb074e *inst/breast_cancer/visualization.R
f4e7d63a892a67c1ab25ec18421baae1 *inst/doc/PepSetTest.R
0cd468c31e785e79a5f5e6a88107fbee *inst/doc/PepSetTest.Rmd
715328dfdae49fc7741203d693b16baf *inst/doc/PepSetTest.html
3e0af362cf7f9098feaab588bd1ed9af *inst/simulation/analyze_sim_data_corr.R
7902d805092f408e96b3a56b9b23ed1c *inst/simulation/analyze_sim_data_uncorr.R
f2492c4f939bc6fe024b206c4f6a3880 *inst/simulation/compare_mixed_model_vs_Wu.R
ea1a869960edbe8b3d44623db64a2eea *inst/simulation/estim_var_lm_vs_limma.R
b5e63c1bf81cd5efbab11c6bdc975e98 *inst/simulation/helper.R
6b170209a35b53a2e312ae1ee72f1610 *inst/simulation/sim_corr_pval.R
42b3033146e797ccc00bce83b597961f *inst/simulation/sim_uncorr_pval.R
702c7fcf0f7fc421eee5f473421045e9 *inst/spike_in/spike_in_dea.R
ccd55b7099235cc3eaafbbde2bc826f4 *man/AggLimmaWorkflow.Rd
a77841f8bf54f8a2869dd6db9ea32949 *man/AggPeps.Rd
c0b599120bcf5946b17b163c51ab87eb *man/CompPepSetTest.Rd
e5116e3374ab969ec9b7337cbe6c6f4b *man/CompPepSetTestWorkflow.Rd
04518f7509d551c359ad3c8f820d5a9d *man/EnframeContrastsRes.Rd
73706a7cb4b3f7756999c3c9694a6c74 *man/EstimInterPepCor.Rd
dd91c19ecb76efb5a82897df658ee4d3 *man/FitContrasts.Rd
7650a34638af02ec15332197d3307ae1 *man/FitLmerBySample.Rd
e03689bfc1f1c9dcfb17e05c80740a61 *man/PepSetTest-package.Rd
c990bab86a03bd677854c45dcbfb0d5b *man/RobustReg.Rd
413f6a9fc65a91386da82b91591e155c *man/SelfContPepSetTestWorkflow.Rd
4f3f659b0a94069f7636739b79ee9992 *man/TTestwCor.Rd
0cd468c31e785e79a5f5e6a88107fbee *vignettes/PepSetTest.Rmd
