082795bf4b335db596bdc59cb32f901b *DESCRIPTION
77ac02c2112038b573405f21bb762285 *LICENSE
65d9ea85841d6ac3dc1ee3afcf2f0710 *NAMESPACE
cffbe74ecf558420cb0c6313edee8834 *NEWS
4bc03f97b7df15c7e55960f2ad2498e8 *R/clusterPlotter.R
1d272efd8ba143124f7e2d5acd5011d0 *R/data.R
26068f869fb3b43fe77046c89531f047 *R/differentialPathwayAnalysis.R
ed15cc16d4ae05b53f31f5ab630c5e51 *R/mappingPathwaysClusters.R
d23bca01c641aef22592abfec42d1b99 *R/miRNAPathwayEnrichment.R
5e5d7a4d464f6bc5673dc0c2dbd6fe94 *R/miRNAPrioritization.R
598b66ad216371ad4e6905892f81392c *R/utils.R
3740e58b7fd1176556b63af078c0f1ff *README.md
fd824c11e352c30a6c63368f5d24c395 *build/vignette.rds
9dbb08b085a3b079dac56ac989cd0a94 *data/datalist
e2aa218f2fe1d91195ac62c7a85a44eb *data/gscExample.rda
9f9c4ba8ccf38510e79c02f91cc566ed *data/miniTestsPanomiR.rda
58741939a19261ed143f65c21233ca74 *data/msigdb_c2.rda
05b8656c23a836382321c014e29af414 *data/path_gene_table.rda
2cd5a33bce0a4f53ea772e66b5c98659 *data/targetScan_03.rda
9c4e8ce9cfbab6551231340fba221de0 *inst/doc/PanomiR.R
f2950ceb212ad5ae46e6618838d3b48c *inst/doc/PanomiR.Rmd
b66190624dd2036da502c7c47239a7d5 *inst/doc/PanomiR.html
99b51714da62162fafa25923f73aa85d *man/aggInvCoverFn.Rd
c896fe8f804290be834a0157513820bc *man/aggInvFn.Rd
3e94051b70a29ae86e10ac13b9f113f3 *man/aggLogCoverFn.Rd
6dc5798321ef3ce6f54143fc673f303a *man/aggLogFn.Rd
feea7414756b27db04d9df43cff6861f *man/alignToUniverse.Rd
3b6fb8a3c7dd26d0823519c8374cc7d6 *man/clusterPlot.Rd
0b96d65d3b80254465602e32b263f7bf *man/differentialPathwayAnalysis.Rd
23f350a06dd130ad4cd7b4837c8bdc81 *man/enrichAllPairs.Rd
745b851946232030670dc65eaaf6eddf *man/getDesignMatrix.Rd
f00151e4acaebd433436148003b444e2 *man/getDiffExpTable.Rd
6af6159dfe7390e74569f88e2a08ae57 *man/getResidual.Rd
c093810ac169adb196ee8abd1b9c1742 *man/gscExample.Rd
689182c6e10338aba8662100d5f6681e *man/jackKnifeBase.Rd
f6c728f00de2484893e98a25214c331a *man/linColumnFinder.Rd
2617c0aed2dd6050392ccd6a44d9384c *man/mappingPathwaysClusters.Rd
9976e25eed39b3a6c5ce197646909528 *man/methodProbBase.Rd
e6b05504b5baaff6a2a6292a81efb866 *man/miRNAPathwayEnrichment.Rd
f956716e1fe593cd02708b57d88ccfea *man/miniTestsPanomiR.Rd
2415f223e75220f6206f3840d1310bc7 *man/msigdb_c2.Rd
9aa9bdbfbabde62f3ecb9a50a7a0d2bc *man/pCutCoverFn.Rd
65e27c0bf691ef9cab2878abf07aacf4 *man/pCutFn.Rd
d69867e8ecd15f1254637a4973636e09 *man/path_gene_table.Rd
4d5740aa3278ad1207e7178192c6d54c *man/pathwayGeneTab.Rd
96d084dec49de208ad57a9d78e63f54f *man/pathwaySummary.Rd
ce4fa801b2f9c25c819a89072e119cf0 *man/pcxnToNet.Rd
120fc5659dfc048f8fe3532aa3131b2d *man/prioritizeMicroRNA.Rd
f101b2ea8b93321149b6eb1e2667f313 *man/reportEnrichment.Rd
0c60c222bda788a0c336b56f662e698e *man/samplingDataBase.Rd
1875686c060bf81d9b938e3b02f588ae *man/sumlogCoverFn.Rd
5c0cb34176845786698cd7bdaa35e79a *man/sumlogFn.Rd
2134dc49f9198d70a7f4740f589713c5 *man/sumzCoverFn.Rd
a7c792c58658d1eb2c42da76a7b33eba *man/sumzFn.Rd
a51d6cd485a8ef60536b683d1380db45 *man/tableFromGSC.Rd
3244417af284959fb690103931343d33 *man/targetScan_03.Rd
73b1ab4e906761e2e7cd76d5e24eb212 *tests/testthat.R
57e14df2b936af31772c83f6f8d93a3b *tests/testthat/test-utils.R
f2950ceb212ad5ae46e6618838d3b48c *vignettes/PanomiR.Rmd
b7d7de2022847ba817613dc96949b849 *vignettes/references.bib
