d3c636e1f4d2a8fa8edbf1ff0464f404 *DESCRIPTION
6309924f65dad27096fe46a624b4a4d2 *NAMESPACE
8af2afae94d9b28e1fed0cb002328e1c *NEWS.md
be8081f20539c0077683a258e34c194f *R/PMScanR-package.R
b5f52dd7c4a88f0c956930cd036f901f *R/UIPMScanR.R
8ba6e8637bf1b74188f5bee61238ca4f *R/app.R
14ada901fd017ac31455af79771b4aad *R/extractProteinMotifs.R
a8a84ed8da25f0c8134fdef9255df704 *R/extractSegments.R
f4772b51d2af71f2c47b98868f33f6cc *R/freqPie.R
bf5226ecc94aef88cbec08b498445122 *R/gff2matrix.R
412dbf7729eef240f1f0586ca09ec2ae *R/matrix2hm.R
7722d497e7f3c980d67261758f28d509 *R/matrixToSquareHeatmap.R
300e36232a65c1dd20bc71f1856f7f03 *R/prepareSegments.R
99e770416ccd13ac97281d01e1791824 *R/readProsite.R
981762fc64a97fc81af49431ee482e3e *R/readPsa.R
2f13397c0edc6af00e3089c0f215c781 *R/runPsScan.R
a03fd4d870440c02b3f7eae43a039539 *R/serverPMScanR.R
5e3ac4e7837a9d5b300dfcac5da84c55 *R/utils.R
b7eebe1f94b06ac1d6e3264014a3085c *README.md
29d275455b3a2859f54fa3e005c0d472 *build/vignette.rds
00c909132ec02ce779749df9ad4b8dee *inst/doc/PMScanR.R
e3a7865598ce3e47f011aa1b59db1210 *inst/doc/PMScanR.Rmd
804b1801ee11b68bd0489195d30599ca *inst/doc/PMScanR.html
4833cffa1dc07d5487b667f31fa5a5c1 *inst/extdata/PROSITEoutput.txt
b980555a2bfdbc8717449692cde5edd5 *inst/extdata/Tutorial_script/Step_by_Step.R
08458ff89ab1c0e4f995dd98b2f77134 *inst/extdata/hemoglobins.fasta
dbb1ceb4b035b0a9b328717b523ec50e *inst/extdata/out_Hb_gff.txt
b6ac9cb7cf93b8b70e03f177e79647b4 *inst/extdata/out_Hb_psa.txt
3e9333affcb2a2a13e3922252d521b6e *inst/img/PMScanR_1small.png
10802336e7215cccd6f820044de104bc *inst/img/PMScanR_2small.png
3becea51d36c5e35b6e83d00aeb1c4bd *inst/img/PMlogo.png
411ba443b0b961201434ffd5ad000931 *inst/img/PMlogo_3D.png
995e16cb7265f068c7b1053221a0829a *inst/scripts/data_provenance.txt
aa67355c1bf8e614e1efe18ec7ea89cc *man/PMScanR-package.Rd
f4e93963b113b3329d2a604136e14ac2 *man/extractProteinMotifs.Rd
b08c47be3ebc3b729e0f17ba59d71892 *man/extractSegments.Rd
367f9646e490f498fed6908ef16e559a *man/freqPie.Rd
0ef444f9fdee52f8728d52db96038527 *man/gff2matrix.Rd
c28fa712bfd209af6155ef51a7b81893 *man/matrix2hm.Rd
b110890b1de90d4a0f12a5eea2d274b4 *man/matrixToSquareHeatmap.Rd
d4d578f598d67dc8a8c961ce4f339e94 *man/readProsite.Rd
04846794a78ac4db741693a70512bd2c *man/readPsa.Rd
6852fd436255fba8223a59dce93d66ff *man/runPMScanRShiny.Rd
113b7d63205212623c43a853703e2002 *man/runPsScan.Rd
101436e517598ec3ea0199ab0c0e2058 *tests/testthat.R
38d88a1bc9bb3e2d3a8bbe9bf2f5c266 *tests/testthat/test-extractProteinMotifs.R
7528119f08eb5cfa5851e2e904a0d346 *tests/testthat/test-freqPie.R
3148a988df83767c5197d476cda2dce4 *tests/testthat/test-gff2matrix.R
e3a7865598ce3e47f011aa1b59db1210 *vignettes/PMScanR.Rmd
