98731014a09766a039b1606e70c8873e *DESCRIPTION
c7075d97b09e3ee39e6b0a664bf125bd *NAMESPACE
9a61776b5bff9a4175c5063affec3b30 *R/Lee2019-data.R
cb2a871b0f2a713a9290cbfac4c00241 *R/Lee2019_meta_vals-data.R
b8f02bcd98cee9ffc0c03c0ccc5efa0a *R/function_Spectra_metrics.R
86486311009bcc97f23ac2a4b79c20c5 *R/function_Spectra_qualityMetrics.R
afcbfbcaa3ba839f078175774b3a71db *R/function_calculateMetrics_from_Spectra.R
a3649c0a03eec5e33b3fcf9489828aed *R/function_visualizations.R
a0cd31d8fe14e243abf897f5ba6f1b35 *README.md
5ce8b29f5878254f7c7252dbc22abbfb *build/partial.rdb
2fb1046822c3d317321ca35eb3ea4e35 *build/vignette.rds
59c3a530fc1c63bb49b603c014ab4136 *data/Lee2019.RData
9e8103949ee2c96f599e2d24eaa8d94d *data/Lee_2019_meta_vals.RData
12c6f06287a9563611efb513f23163a9 *data/datalist
005c35d968030e03bf650e0497f6fbf4 *inst/NEWS.md
98a9d377090133015d534f0f9bcae206 *inst/doc/MsQuality.R
6129d8b4cfc2807e93ff8a994ed52421 *inst/doc/MsQuality.Rmd
e9cb1e25fbebceedd3bf10035efec71d *inst/doc/MsQuality.html
e4d9353ed0c33f34cfa44234bbdc2841 *inst/scripts/Lee2019-data-source.R
fd2b6f77c68c3770fb729166ce2d374d *man/Lee_2019.Rd
0a4228f28e7e3ab59427b060986ae4ad *man/Lee_2019_meta_vals.Rd
03db881ecfdc6b609d06917b8f25b462 *man/MsQuality-package.Rd
1ee41900487782946d379957263e4907 *man/areaUnderTic.Rd
2d2f1eaeb61daaad106288d6ece90569 *man/areaUnderTicRtQuantiles.Rd
fbaa7aa864a6cafd7285e71b343a1443 *man/calculateMetrics.Rd
1afda91ebf58934b3394593ee89f763f *man/calculateMetricsFromMsExperiment.Rd
f949c7050f75e47f7b6a0d59ca5d7df5 *man/calculateMetricsFromOneSampleSpectra.Rd
9bcb841a45946acc899e9ccf93b45f18 *man/calculateMetricsFromSpectra.Rd
be519493d5a58def7fcb3f6b32c9fe31 *man/chromatographyDuration.Rd
7942e4db29a691d1e278696b8b2d53bc *man/dot-rtOrderSpectra.Rd
16c74762c8cede36fe9c9de83a6911a7 *man/extentIdentifiedPrecursorIntensity.Rd
ebb3580eda19ce7bd6c9d499e4556dda *man/meanCharge.Rd
d29f06ae4ff3cc0e8f1a97a3a0303e0a *man/medianCharge.Rd
8f4fad5203e0d4a599de934cb75ca67a *man/medianPrecursorMz.Rd
ba1e5354002e95248c9c2798f5bdc9f2 *man/medianTicOfRtRange.Rd
4aa497dac4d0beaf3cce051ec0467be1 *man/medianTicRtIqr.Rd
ce66c35012f3bea4b2d10bb14ed1153d *man/msSignal10xChange.Rd
1430a1787dfaeb3f815e8ca0d09af21b *man/mzAcquisitionRange.Rd
b34a671765fb366443bab5f28f5f2b67 *man/numberEmptyScans.Rd
f250c4d8c097f14a12fdf11f21070205 *man/numberSpectra.Rd
a91994711a1674a5091aca91205a528c *man/plotMetric.Rd
9e2d3018af6f776c8e560c82448184c0 *man/plotMetricTibble.Rd
abdbefd55bb9bb08f21a173206783cac *man/precursorIntensityMean.Rd
5dab9342d84fc28a88a19fc8d34c09ae *man/precursorIntensityQuartiles.Rd
cdb9a6fac65a85cde83831adacdc5108 *man/precursorIntensityRange.Rd
9db750f3ffcf7abf9465c03a0c6b9f77 *man/precursorIntensitySd.Rd
f4cb6c8d0ada94102cd0957f59ebca88 *man/qualityMetrics.Rd
e10bac4279e6f153da7b6889999e7f2d *man/ratioCharge1over2.Rd
b3b97d33bf4f7921d97011f00840ef61 *man/ratioCharge3over2.Rd
107ce5a1f5725fd1af7d80fffaad90e1 *man/ratioCharge4over2.Rd
6fcbd48702a3b291e887c61e2d264231 *man/rtAcquisitionRange.Rd
04e99868c25350be980b8b8227be6a53 *man/rtIqr.Rd
f273a998138183a38cb56c021a63314f *man/rtIqrRate.Rd
990928a9d364b3f8a037d8d30049fd05 *man/rtOverMsQuarters.Rd
685895f577196dae66546d3692bbbac2 *man/shinyMsQuality.Rd
f0fdc0e57cec9de32d195192a46c8832 *man/ticQuantileRtFraction.Rd
121c1c32e93893b747c2d922a69a7bd9 *man/ticQuartileToQuartileLogRatio.Rd
2007849efef094e77e5f107be96f95c1 *man/transformIntoMzQC.Rd
e32ef8b0a59b620430854294f5758f87 *tests/testthat.R
3a3a4576ee562196097fcdc6160bc488 *tests/testthat/test_function_Spectra_metrics.R
9d9e92cab92bb1ceda6ac8638d39a1b3 *tests/testthat/test_function_Spectra_qualityMetrics.R
2a816c883452fdc6613d58bfc59d02dd *tests/testthat/test_function_calculateMetrics_from_Spectra.R
6097072980d0bbd16b7fd242fd958897 *tests/testthat/test_function_visualizations.R
ec716aa02f6b214836985be9967a744a *vignettes/MsQuality-citations.bib
6129d8b4cfc2807e93ff8a994ed52421 *vignettes/MsQuality.Rmd
