76ae99019abcc01a8df6a97a5ca20f59 *DESCRIPTION
9d2d5d614990d2579e3cfcf529dc2c67 *NAMESPACE
b75b924c6d4372aec4bbb58b784a7e1c *NEWS.md
52cbf401639ddc2b3b79a2bbb3d5b765 *R/MethReg-package.R
3e14f50296961514274cac304a726d09 *R/MethReg.R
eb2baefa648928dccfaa4d4f50964bd1 *R/cor_dnam_target_gene.R
6694d4081d99219695aa6d73be1954db *R/cor_tf_target_gene.R
a5dfb3e69f2851cf7b64b84fbff7fab4 *R/create_triplet_distance_based.R
321220e93331a42d705927ff1e6d95ad *R/create_triplet_regulon_based.R
f1b99831d139848acfb338ea00c0ebc6 *R/filter_by_quantile.R
58f3476e741ba8fb49669acdb5e82289 *R/get_human_tfs.R
1812f08327b3bc62fc5edd8dc3338eac *R/get_promoter_avg.R
3fd78c488715d9fa8ee795cba87db6a2 *R/get_region_target_gene.R
a8e3fdf956d142cfebe663e05f55cf70 *R/get_residuals.R
bc297e5538c8133c38d33ff779633b11 *R/get_tf_in_region.R
77da47de24c6e3770e9df834f23403f0 *R/interaction_model.R
fc04cb7f06608cb1c3a42b8ec14e078d *R/methReg_analysis.R
35390596a5a9f2eac3aa2cc9135a651c *R/multiple_testing_correction.R
a4bd8e0ca8b36412709085e61bae00d7 *R/plot_interaction_model.R
48149175779d38cea778af3144d730a3 *R/plot_stratified_model.R
f5f7921a65a9f5c4d28feb44f0f6f92e *R/regulons.R
5248d340fdfdf2b6b3876b02bcfed11e *R/remap2022.R
93fc3a525c8e0f4f949f32093729013c *R/stratified_model.R
6fd612dcb5410f9609e15551b4b8e5eb *R/sysdata.rda
80c3b9d90c6004f705fd2bb152143d83 *R/utils.R
12ba15a29eefd95fd35acb9260b2e1d7 *README.md
dbc621d3e0074676858ff091540baa16 *build/vignette.rds
279cd33ed69e02f8bed32dff0d80eef6 *data/clinical.rda
5ad8c0a75026e49c8172c2b5b29b0afa *data/dna.met.chr21.rda
e770eb19583f9cd62db3bfe6e3d33c0c *data/gene.exp.chr21.log2.rda
27940eac0c78b9e912a09b75d71dc36c *inst/CITATION
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f865610c0af95a2baa76abc9d830ffbc *man/clinical.Rd
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9c8d38aad387a2de2680fb73ef64880d *man/cor_tf_target_gene.Rd
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6fda3ad545f92d806aabd1caaa197d05 *man/create_triplet_regulon_based.Rd
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47ba6eec9d97fede32c850fe2122f575 *man/filter_dnam_by_quant_diff.Rd
5d62de02b7e48459a7fd216392824a7a *man/filter_exp_by_quant_mean_FC.Rd
344c817e920a8461c86ae5c11f2947df *man/filter_genes_zero_expression.Rd
632ee6aa275c67edb40749810acad961 *man/gene.exp.chr21.log2.Rd
e31cc4d8d572a5f0eae6d34bc6df1ae2 *man/get_human_tfs.Rd
af8d0877524ddd9ea1bcedd7e18a66f0 *man/get_met_probes_info.Rd
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aa8d1724f709e0a4ce3ce4970d606682 *man/get_region_target_gene.Rd
7a5fb6d55415eda548449a5983d09cfb *man/get_residuals.Rd
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54a4519ccbb35fb23d895802f716e791 *man/interaction_model.Rd
181863174b7c44c4c733e7d219b5c502 *man/make_dnam_se.Rd
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45c997ed89495ac255be5d702632a016 *man/make_names_from_granges.Rd
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9966be0a7845827222cae96ca3b73c48 *tests/testthat.R
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ddd4622bd579191c4a1f1a26a2aff199 *tests/testthat/test-utils.R
d88a60b52f9f7a27880fa60f6142cfdd *vignettes/MethReg.Rmd
913790a5e8cc00930ab24e799e07732b *vignettes/bibliography.bib
2b7720a55cedf899ebadea17ddf1bc62 *vignettes/highlight.pack.js
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0350cb6add51ed480684ca3f15f76e51 *vignettes/styles/stackoverflow-dark.css
700b4d54d947c4ca824a79e7e3cea6f3 *vignettes/workflow_methReg.png
