1c7d53c718b881da3c78ce96cb2df7a9 *DESCRIPTION
4b1d225ebb361ee3bb1d6bed6353ab60 *NAMESPACE
9490e15a4a32d908794bba858e076050 *NEWS
48f46db45ae2eb1a9e67780f892d8e38 *R/DEGsEvidences.R
9da2074896a8c94573363c9c11f032b4 *R/DEGsExtraction.R
297f918ac329527e75541fdfce88f419 *R/DEGsToDiseases.R
a651287adad49bc8e33622fa13981e79 *R/DEGsToPathways.R
f0a247561a3f9aa4b9747a23b75ae0b9 *R/RNAseqQA.R
de47658dfbcc4f926890bf951f2112fd *R/batchEffectRemoval.R
ce28064803d766a7ee10ba0fcd64b29a *R/calculateGeneExpressionValues.R
f1271754dc7bfc3a94c2a8035fd0fbc3 *R/countsToMatrix.R
7d63964e55b87313e070e35288ee4fe9 *R/dataPlot.R
538330e9dfab680e8af0594292955035 *R/downloadPublicSeries.R
56daa3423340de1e5dab761f100448ab *R/featureSelection.R
372e4d75b91f5f423663d9ed4679c742 *R/fileMove.R
249ced3e3afde5bc2d874cbf4b6b1e44 *R/gdcClientDownload.R
62f1bf46ecaea9f8c63fc5ffc1bbc9b2 *R/geneOntologyEnrichment.R
e67a3ec10c7c135022d1334addbee836 *R/getGenesAnnotation.R
7d8f02870e45b7b4fc960ee701dcae59 *R/hisatAlignment.R
b5acb4986f6b53955c47a5794df44e0c *R/knn_test.R
fbcb5773b74386458386818232339c49 *R/knn_trn.R
e1647d67c0eca12816cbfd11179db62c *R/knowseqReport.R
160a19b7972231eab90a5c2fa85f220b *R/plotConfMatrix.R
89b4df159bc6a752fb0784f047163349 *R/rawAlignment.R
366419653025d5a5830c7eb030d5541f *R/rf_test.R
7f1a627493cf10e109acb2f1f8afa50d *R/rf_trn.R
e58aa30d83a829d3ac7f5311350cc2b6 *R/sraToFastq.R
7ca69dcd495f95781a2ed8fd70fb7f09 *R/svm_test.R
cc1cea80d17a6a0c946bdcdcb909a788 *R/svm_trn.R
495a9aa7454746eb02098dcaff0ce09b *build/vignette.rds
67dc6b84c509708417ac65aa7f2c7475 *inst/CITATION
1a2a6ef50ac5552f303cdfad484e0cc4 *inst/doc/KnowSeq.R
5db666abb0e1c625817ad1ee7f86a882 *inst/doc/KnowSeq.Rmd
b407b42d311476ef769af449bc452c33 *inst/doc/KnowSeq.html
b8a615f21849368c3bf2c35e5b9790c9 *inst/extdata/GRCh38Annotation.csv
2ae0c8d4f805c7ed6c9e6034431308f4 *inst/extdata/GSE74251.csv
8bcb5f744ee1639c11b2fe65d3cb5ccc *inst/extdata/GSE81593.csv
22cd8b4cbba53e0a3affd8a6758cb403 *inst/extdata/Genes_length_Homo_Sapiens.csv
1c8900040366510e1eb8410c9e5efa0a *inst/extdata/KEGGPathsDB.csv
010e2873d7b4f3258e54759641e53e80 *inst/extdata/countFiles/SRR2753159/SRR2753159.count
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e255fd7ffb31ffa895372fcfb2581c33 *inst/extdata/countFiles/mergedCountsInfo.csv
c973e1cae2a44114c6879070d834f744 *inst/extdata/expressionExample.RData
a5dd9924a381c6faf90340b9485d55b6 *inst/extdata/report_style.css
138c1206ccb4dd41031392b60c6c3a47 *inst/script/KnowSeqExample.R
b8b820f6a2174e90d3831af9ae27f363 *man/DEGsEvidences.Rd
3a6eafeb442a2fe3b10b3a1b9c78cc82 *man/DEGsExtraction.Rd
97734f69e1eeb1dee7bc5812663fe843 *man/DEGsToDiseases.Rd
79e52aac5840ff70fba3f3d3b678493d *man/DEGsToPathways.Rd
f97a022ce91031ccc938b6f894ae79ed *man/RNAseqQA.Rd
0eccd62c398cab64f9007564ed04cae1 *man/batchEffectRemoval.Rd
6471c0379dfec0a10d7dafea337ad8dd *man/calculateGeneExpressionValues.Rd
84d34fd87f8f0debf5893a7bf8d98c97 *man/countsToMatrix.Rd
69423f32967671a38dbb5df5d5b8ef56 *man/dataPlot.Rd
99239add8de13cbf4853ba2999efab2d *man/downloadPublicSeries.Rd
096fae44e4cb18851137b5581844617f *man/featureSelection.Rd
81c78febebea221081c709c267e6f873 *man/fileMove.Rd
caadc2884ecea5c52899dce77702b6b4 *man/gdcClientDownload.Rd
153e40d3d62a29ea4cf86f29c5bdbb5c *man/geneOntologyEnrichment.Rd
294d0c9c065e3315a1ac68fbc894da49 *man/getGenesAnnotation.Rd
f01ee1a46b33ea59a073358858e95c35 *man/hisatAlignment.Rd
1365019cc8ba391aaf73054af5350022 *man/knn_test.Rd
d763cae9bd9295086d12aba2bb5976c0 *man/knn_trn.Rd
750dc29bab8c1c316b2cbce0cf263949 *man/knowseqReport.Rd
49cfa1fc19b0fe3c0d5c529ba34ae329 *man/plotConfMatrix.Rd
d4bfa45a352176bbcf837f5a6bb52256 *man/rawAlignment.Rd
8c97ea21013b0ec23970e7cd76b22e98 *man/rf_test.Rd
b5caaa730fafee0a4d410e9278f3ea29 *man/rf_trn.Rd
3fdfbd61d4c09fe6533927706478df9b *man/sraToFastq.Rd
a255daa714de24e9b80db05c4f4884f1 *man/svm_test.Rd
67a1ccc62e562b5865ad0ee8b1cd7eac *man/svm_trn.Rd
ffe63df394adaf074c89e23e22b05f70 *vignettes/GOExample.png
5db666abb0e1c625817ad1ee7f86a882 *vignettes/KnowSeq.Rmd
b692f17978b7977651241d6356b21d5b *vignettes/KnowSeqPipeline.png
402847315cf72f0bf7870121a502e547 *vignettes/arrayexpress.png
e0fc908ea2b0cabd4c1a5bea934ec7ea *vignettes/diseaseKRT19.png
e891a0edbfa2e90409c50dee99490eab *vignettes/gdc.png
4e01f740caf6d5d7d5abc33cfb6a34b6 *vignettes/ncbi.png
a5dd9924a381c6faf90340b9485d55b6 *vignettes/vignette_style.css
