afd4bbf3772a7a63bae9fa75b1b9fce6 *DESCRIPTION
b18d79690028d770b245d5a859ead522 *NAMESPACE
51eadb0a47510be1fb2fffdc6edc859b *R/correction.R
0478da3847c665e12867653bc436feef *R/segmentation.R
4fb67ae5c616b1e5363eeba8a7178918 *R/zzz.R
0a250dea8d741fa9401224a4492be0ea *build/vignette.rds
741a9058aba2756477a2b038689015ef *data/tumour.rda
d260c09f294966947f4420a76fd0da77 *inst/doc/HMMcopy.R
c141bb3a5564d0a0baabca8b7b320101 *inst/doc/HMMcopy.Rnw
4dd84a3462c3e71640ff93a0ccb8ca5a *inst/doc/HMMcopy.pdf
bd3313f24dd384e1e137a508fd9ab737 *inst/extdata/gc.wig
0d0ec97fb95655c5dbc96d3b95c5a453 *inst/extdata/map.wig
d74ff8829bcbd0775cf6315294eb0aee *inst/extdata/normal.wig
a6bc33b9a0e21f462135ccc321f33f39 *inst/extdata/tumour.wig
513f7997831e6ba22771d87664f1e1d7 *man/HMMcopy-dataset.Rd
e33f6d4b6e71d835d923eeebcf06230a *man/HMMcopy-input.Rd
29cc1fdcf03f14de171cf9fa2126ee5b *man/HMMcopy-internal.Rd
c233b14a964c42a9a823a8a26f4b50c6 *man/HMMcopy-output.Rd
2796cc9fe5cd343ef047ae852e6684db *man/HMMcopy-package.Rd
6e02b6a3ed07c69ee351771a2c80ea0a *man/HMMcopy-visualize.Rd
28a642c59d79ff1925904b0012e1e610 *man/HMMsegment.Rd
f4e5e2efd85fef2e6754dbf26f795b7e *man/correctReadcount.Rd
7bf1c23e71c3df92feb2d8aa35eeb39a *man/wigsToRangedData.Rd
1526ab2213685856c722268285fab9e1 *src/forward_backward.c
ecf3284a39029751043ec54423cc28ae *src/hmmcopy.h
4395b5f0812af5231660fe1ce3204af2 *src/register.c
b6e2f3c92ad34410d5162c53f131cbd8 *src/viterbi.c
c141bb3a5564d0a0baabca8b7b320101 *vignettes/HMMcopy.Rnw
1f2de410d3c487aeee1390b7aef33ee2 *vignettes/HMMcopy.bib
