71da6817adceb7217af953c01094139f *DESCRIPTION
ca25e62aea91c1d2275341b0e59a800f *NAMESPACE
193ae1c298af671aaf5d599ec3fe7388 *R/calcGC.R
b537cfab6e16c7d984928052d83f52c5 *R/calcPrototype.R
04183faaac093dd1eebb4ad9ae82cf85 *R/calcTm.R
6949e6fe5d3b1850b799b19ca0e4fd54 *R/combineData.R
3fce972c51d800efc86f4a97f3748c22 *R/createWiggle.R
de2db0a7b92412ea8ea3b7d8e74fe75d *R/exprs2.R
c65b8257e1a516afbf0b6ade03b5ef57 *R/fuzzyMatches.R
e084332ce6ea0b5b7939ed389209585f *R/getFeatures.R
02ee5e0c03c355b0df29dfa0ce3bbcd6 *R/getSamples.R
ed79ad7a6004359e0c8e70069408672c *R/plotBins.R
fe9d6ad725ac7f63d7d92f65abf86150 *R/plotChip.R
9246e75c4fb63d6aa94baa4bb2497699 *R/plotFeature.R
cd362ee8c5ef282a3d1b8dd239e9d2ab *R/plotPairs.R
522fd7ae3904b19157b823ff4489435a *R/quantileNormalize.R
9293781818e0b649ef484a55990edd66 *R/readDesign.R
1c868b0d074c6e2753b483cc62e0fe0a *R/readPairs.R
0b991da4a398657a86591dd22dd7f2c3 *R/readSampleKey.R
6b92ee0051560e8476235f57ef88387f *build/vignette.rds
d3d80a695d1768db45f9c7ffc159b2ba *data/base.stacking.thermodynamics.RData
ebd704dc89494f86f4603cc018991086 *demo/00Index
5161f9229767908314f71d9c2cc0a7ba *demo/pipeline.R
d7d3c21ce330ab50a374bfd73b7dea9f *inst/doc/HELP.R
5d07b0ea0534d24ff057981d0cd2412e *inst/doc/HELP.Rnw
1919cf0fc9b2f91add4647fb9aa002c1 *inst/doc/HELP.pdf
353b72231b85b2eee2a9a28cb316c768 *inst/pipeline.data/70989_532.pair.txt
cc1a73ace3cbf16cc9b9dd708ee070e0 *inst/pipeline.data/70989_635.pair.txt
6730e6dae28ab23581a12fc55d3958f8 *inst/pipeline.data/71083_532.pair.txt
47a339e5b99b1fbd7db45487d14f6261 *inst/pipeline.data/71083_635.pair.txt
800586f6384926154c554050bc019520 *inst/pipeline.data/71420_532.pair.txt
0a16302fb56d669be9d1fe4af76928e7 *inst/pipeline.data/71420_635.pair.txt
14bdb8f3524a0c4df6cbbadebe44e1a6 *inst/pipeline.data/HELP.ndf.txt
91de4ebb332edb82a87f175e98c99835 *inst/pipeline.data/HELP.ngd.txt
c3e59ae650468c717f841940c559cd5b *inst/pipeline.data/HELP.pos.txt
48471783f9e491728473336dafc620e7 *inst/pipeline.data/sample.key.txt
f0251d1847a577ce3dab2041c4acafb0 *man/base.stacking.thermodynamics.Rd
9d9663f242b76611375856d61b43c3ed *man/calcGC-methods.Rd
c5ee18f7902e245658d912d5a2ab2244 *man/calcGC.Rd
19db5412905a2a408479686bc0c015d1 *man/calcPrototype-methods.Rd
729d160fe454223e13a73a6c0ea9d4a8 *man/calcPrototype.Rd
454d68088bde8ea2063fba0fed564c9a *man/calcTm-methods.Rd
5f559c407928dcda22815fbd88b5e9cc *man/calcTm.Rd
5e2abe9655bd28213ed1ca226f1a2135 *man/combineData-methods.Rd
0bfdf073445af8a32a9edb408f732498 *man/combineData.Rd
1a1d16bc5bb7fa0a15aeb46ce149d3d6 *man/createWiggle-methods.Rd
3a97c4a8912f41697c6bb2270a94966f *man/createWiggle.Rd
619ac834dff6082991efdbb8ca5ff21d *man/exprs2-methods.Rd
2b57eadbc4fcfc2c5a3da1b6c1c9cae0 *man/exprs2.Rd
ef5cf443b0fccbe030f2c7dcca1ca634 *man/fuzzyMatches-methods.Rd
4ac1f3bee4aaac84db118f5847e32e0e *man/fuzzyMatches.Rd
d84597547b92f51b437f027dc13c473b *man/getFeatures-methods.Rd
b348674e6bac1f3293ccea7bfdfbb3c6 *man/getFeatures.Rd
807633df91499488d93793b9fb3c6d62 *man/getSamples-methods.Rd
8cd34fe66508efb89bbd037b33091e5a *man/getSamples.Rd
1946b08e4eb6f0be3b465f7d15a06ab6 *man/plotBins-methods.Rd
720c9425eae2e671f678d8315a528361 *man/plotBins.Rd
f8e2db25137b6e2f2b5d4aa4cc38a188 *man/plotChip-methods.Rd
e6adc0ead03d25aa172af5c7e8b7654e *man/plotChip.Rd
5f5ef1211dce51f54223650571e24dc4 *man/plotFeature-methods.Rd
9a5c1e2fd75cd5e6a2c99a67cb070ddc *man/plotFeature.Rd
89495fce4fb4fadf4e6e7d345b4c8d77 *man/plotPairs-methods.Rd
c7e552a97039a295b65d04cf483361cc *man/plotPairs.Rd
4a05f78286e7be5d18c3fb0603437cce *man/quantileNormalize-methods.Rd
fc750a10f05e4d9734e4730991abbfe2 *man/quantileNormalize.Rd
c88944632d9b233f66a76f7ba6c76f7c *man/readDesign-methods.Rd
1741ac307ab369da649d0acdfc885c4f *man/readDesign.Rd
34ef0f0e0f3170d38c9873aee9b68f23 *man/readPairs-methods.Rd
e352bf2ceda9c1f365e50225ca7fc111 *man/readPairs.Rd
c247405a6468970ad61d34d6e2a573ad *man/readSampleKey.Rd
5d07b0ea0534d24ff057981d0cd2412e *vignettes/HELP.Rnw
efd071490dba68922d7e3a7e730744de *vignettes/HELP.bib
