2ed0c2575e5416277feb17b9c86683c3 *DESCRIPTION
2c74e0504120c8612166230bab0a4d3d *NAMESPACE
018e38b5926af83a13453e27a0957f6b *NEWS
5cf32c07692d596271e37862af3b0423 *R/AllClasses.R
817360798ad5ef1a0563842c2bef4d56 *R/AllGenerics.R
789523894a994f3783cd443914500bee *R/GSVA-package.R
59574ae6e07d16e21f7b02a200a68ac6 *R/GSVA-pkg-defunct.R
18db387789f75bbdcd66672324a13416 *R/GSVA-pkg-deprecated.R
354e1148562753ded0e072f35b848b21 *R/GsvaMethodParam.R
12e4d21738ebc2b671440e318ab064f4 *R/genesets.R
6176264f82cb9446dada6cfb04e58e0d *R/gsva-global.R
b029643d6074615b01c843c8f53337a3 *R/gsva.R
5514e5f6fec3029def3dbf0e3c021a2f *R/gsvaDelayedArray.R
723887832360c071afdbf6b236db930d *R/gsvaNewAPI.R
a46a2dc7fd3dd6aeea1abc74d60bae18 *R/gsvaParam.R
165007e14dadffab4231ba3c098940e0 *R/methods-ShinyApp.R
6a2e7610bae5ac4df3810811ea117755 *R/plage.R
d859616c83928348b069d689cecd7b89 *R/plageParam.R
1459f1b5cc59fd9718f46ac227bfdde3 *R/spatial.R
aa10ecb6a9875e22a92fa8649fa63892 *R/ssgsea.R
fac3c7c59f1dfdd681d9f7d978a4a121 *R/ssgseaParam.R
8476e11d7ed8bee75a23601a464060bf *R/utils.R
51586e990aece5f06fa725f6f7a16450 *R/zscore.R
af9e4bba369e1d5328742c006031097d *R/zscoreParam.R
9c6efd7ddf2d97709f75552290099051 *R/zzz.R
37a7cdb041349afae7062bd64f253e21 *README.md
1bf18d9c216b8d95033f0bd2fe2906b2 *build/partial.rdb
a66a1e6efbd94c83ffc7348a6450b596 *build/vignette.rds
453d5f90bd6225b9bbf8fa9b9dd1e516 *cleanup
f1b7a918db657cba60304eb978b2450f *inst/CITATION
0fd190daba370306da0d9760dfcf0c45 *inst/doc/GSVA.R
42630a761b4039fbfe371d66560e6469 *inst/doc/GSVA.Rmd
67c5bdcf0059fec659ccfff28493ea01 *inst/doc/GSVA.html
9b2b55130ab0f234c0e77b16f72bced5 *inst/doc/GSVA_scRNAseq.R
a3f4497370364126d6d2fb4676899405 *inst/doc/GSVA_scRNAseq.Rmd
c8de291ee1c3d0af94e9614227c5ee1c *inst/doc/GSVA_scRNAseq.html
d6e6f1223267a06705b40afe7dca4a97 *inst/extdata/cache4vignette_leukemia_es.RData
bf968c2f1b5abd82360ced0ad33aae9e *inst/shinyApp/argumentsDataModule.R
25e2b694159c4e7d07f774614d9a3c58 *inst/shinyApp/closeModule.R
dc214dc088b1cd01628804b5296afb06 *inst/shinyApp/downloadModule.R
9cdb81086c4211775369cd3474d469e8 *inst/shinyApp/geneSetsModule.R
2c65b8e76c0322d7ed8ee293f2c898ec *inst/shinyApp/global.R
864045a809dcb3b5279972f874e20318 *inst/shinyApp/matrixModule.R
15da683e3de9cbf03c45be58a0de0d41 *inst/shinyApp/modalGSVAModule.R
d767155a0a53077a837552b5a9537ce8 *inst/shinyApp/plot1_Module.R
56a93a0297bd15075a35e940e6718571 *inst/shinyApp/plot2_Module.R
7fb0745614ce1f6818ae24101df1f571 *inst/shinyApp/plot3_Module.R
b651b3e5eb4ace75f5358a3d900c8057 *inst/shinyApp/server.R
bed624bd4a37319dce3c5d3351299803 *inst/shinyApp/ui.R
c6fd28f6180768396f84bf00f43a644f *inst/shinyApp/www/GSVA.png
871bcb8b39094743ba2792a9e8f0017c *inst/shinyApp/www/style.css
6616d930440333f862c424477e7af5c5 *inst/unitTests/test_genesets.R
d7267d0b6b5f3fa65f2c94a323e04b3d *inst/unitTests/test_gsvaCcode.R
2b631ae03633fefa230caa151ec5ba1f *inst/unitTests/test_gsvaRanks.R
1afe2fcf92571fbf4ad51fce1323fb67 *inst/unitTests/test_inputdatacontainers.R
704e4200f263b573455ec9bd5d52f832 *inst/unitTests/test_newAPI.R
da861e4c94aa751166f72340321f6b5e *inst/unitTests/test_params.R
89452b3c7fdbf7ea365c5f6f14881abf *inst/unitTests/test_sparse.R
9775e961ead52fbedfcc2aa117c2f888 *inst/unitTests/test_ssgsea.R
dccd81e67deece23e396e51881156eb5 *man/GSVA-pkg-defunct.Rd
3d0d25909987fa708c944470179e4766 *man/GSVA-pkg-deprecated.Rd
16deb4b999c70eeb3d9fa9359432fbff *man/GsvaExprData-class.Rd
a735a8630d79b6c0d0fca3d53ac2f71e *man/GsvaGeneSets-class.Rd
674d32b51b4a21fdf7df9f1d8a74bbdc *man/GsvaMethodParam-class.Rd
b9a450cf9f6b69fa27fcb0d40c18cb91 *man/computeGeneSetsOverlap.Rd
0b4a775519fe094ddf43553d8c6eed1b *man/deduplicateGeneSets.Rd
7e46d890bd243147c0b792340742cde2 *man/filterGeneSets.Rd
8d99eb4a8781db98f14eeedeb7adc38e *man/geneIdsToGeneSetCollection.Rd
225fc7a8d5e2810ab0fe565a805edb7b *man/geneSets.Rd
d6bd3a936e714930c288081d79946ac2 *man/gsva.Rd
e0a9589f6a03093dd9858435bf57098d *man/gsvaAnnotation.Rd
87d4eeff0a682d7ede2a9ab256f225c6 *man/gsvaEnrichment.Rd
cdaac6bfcd368fc2bf3c86419479404f *man/gsvaParam-class.Rd
ed612df6f2ab19a084103f9ef38d115e *man/gsvaRanks.Rd
2e58dc47fbbc1c062d975b2bb225b8f1 *man/guessGeneIdType.Rd
d4def58986783657316ee233aa91d39b *man/igsva.Rd
c9a0b2e217ada0ef6fd58f7e9eafa2de *man/plageParam-class.Rd
0e8ab2747777da1d0b2177931e25ba56 *man/readGMT.Rd
b80d43c426798702a742dcbdd9cc3246 *man/spatCor.Rd
250ab21860d1694a4877f8470f5ad533 *man/ssgseaParam-class.Rd
ee79840882599bfc0f1f153d84441c13 *man/zscoreParam-class.Rd
2f652eda9f62b344ddbaac6eafa349b7 *src/ecdfvals.c
0804f03945503a3657e660258819573b *src/kcdfvals.c
678de1ac17eef6bae12fa116a195b5ba *src/kernel_estimation.c
ee4ad1bd1e1a261b21d5d8d77135abe9 *src/ks_test.c
a8857bf8a3571562d9d8ff54b77115c9 *src/register_cmethods.c
eb2d628aed74f119496edf8a2eb36cdf *src/utils.c
f2310c7773e0506a7998fe8de54969ac *tests/runTests.R
ea3df3394fd093071dd5830f78d6359c *tests/test_gsva_newapi.R
b1a5a4d3db2331a32c105f81de2042a9 *tests/test_gsva_newapi.Rout.save
91d9be4b574942def7b5dec91329e95e *tests/test_plage_newapi.R
8fdd1204271be0e2fe96525888105a6e *tests/test_plage_newapi.Rout.save
d5cb14bee2b3e61b6f02a154db405725 *tests/test_ssgsea_newapi.R
9c85c07b084ae907c87b25531b136ac2 *tests/test_ssgsea_newapi.Rout.save
bca5017b0508a32d68eb3f4a6d923236 *tests/test_zscore_newapi.R
217381ebe3b1305fb539d34ac9004a5a *tests/test_zscore_newapi.Rout.save
42630a761b4039fbfe371d66560e6469 *vignettes/GSVA.Rmd
2c6010cc74749bf01d7b351307dbca35 *vignettes/GSVA.bib
a3f4497370364126d6d2fb4676899405 *vignettes/GSVA_scRNAseq.Rmd
7f8eb02c3a715cc27c9e6954bd8d3b38 *vignettes/methods.png
a407c8f86caaae0ecbe41d26a3e88319 *vignettes/webapp1.png
93e0a4fffed5119c01f62a4751d13f03 *vignettes/webapp2.png
