f929cb3cf2c9725d29c7f567dac7675b *DESCRIPTION
e49f4652534af377a713df3d9dec60cb *LICENSE
772a0ae699eb202d1961c73e84db3caf *NAMESPACE
4063c40b91ff87c97c4365e762f08484 *R/DE_DESeq2.R
1a4f4392f589860f4dc7e220c482c467 *R/DE_edgeR.R
af656e94e394c39596da2c5f1972f2c4 *R/combination_gen.R
ec1338c25e1b72265c4c611389c44602 *R/count_filter.R
9577115a4f2ee4c489aedf1bde77599c *R/erssa.R
0f122bc6a4e6b90b4a5a618fe6eeb9bc *R/example_obj.R
9dee8b6568806e3ee1f0e68ad9760776 *R/plot_TPR_FPR.R
49e920feda11a9ba5618ce47eecb708c *R/plot_dotplot.R
21909cceb78952e7e457761ab98b5f78 *R/plot_intersectPlot.R
2ffad4333a1cebbee9a3f3595f4affcc *R/plot_marginalPlot.R
c79b62fc6653fbd4aaafefe8c1e87103 *README.md
046cd4b314edd9530cd89ba78904a72f *build/vignette.rds
3f1895255e2ac880827557c3b8bf8ac0 *data/combinations.partial.rda
47c3ee4c3c0ca4fa76514b733e8417c3 *data/condition_table.full.rda
e68860039c1a294b2b5dd5a0e534759f *data/condition_table.partial.rda
3fcedb3c45c88631dc493bb04354a2e6 *data/count_table.filtered.partial.rda
07c033e6c09891ccb51c4c513b925e2d *data/count_table.full.rda
25f5ee1007c502ac92fdeb625725a353 *data/count_table.partial.rda
af67c449013a34f37dae830faf6a0ecb *data/deg.partial.rda
971ebdae443f5efe747d2676689f75de *inst/NEWS.Rd
4a4a37fc5555ca5132911b1853c4c5b1 *inst/doc/ERSSA.R
5edf5c821cb115a4a85e7d4794a63c18 *inst/doc/ERSSA.Rmd
124dc1339b3eebca8b93209cc65368a6 *inst/doc/ERSSA.html
a8b7cbccc536ee9cfcab55914d410a83 *man/comb_gen.Rd
4b62a23b566c88c054c86735ef91132f *man/combinations.partial.Rd
2ac96cf0bc9501c7de8674f7352f2664 *man/condition_table.full.Rd
aad3855ef442a9c05de94f1b9537a3d0 *man/condition_table.partial.Rd
fbe1ec17625cfbc15214c773bdeac410 *man/count_filter.Rd
2574f509ab55e9969840337717018554 *man/count_table.filtered.partial.Rd
b416307946db3d7703060c0d5aa0074e *man/count_table.full.Rd
bc149c207713f63a949a967a55e50a0b *man/count_table.partial.Rd
a924f8069c9d4a26245d1022d6294fde *man/deg.partial.Rd
7acaada9449a30f581e7152cc62f5a7a *man/erssa.Rd
631738bb1aec7f872d0dc37aa124c926 *man/erssa_deseq2.Rd
81ab4f013cf9b8b5ff7c7e6b55015916 *man/erssa_deseq2_parallel.Rd
f6f8b6120f31995a50db21a938b3408d *man/erssa_edger.Rd
32a294430266e6a344da5c3354a91bd3 *man/erssa_edger_parallel.Rd
e86cac87088a51e5e0b12ca36c1234a5 *man/ggplot2_TPR_FPRPlot.Rd
c218b0bd76f458b7812dec754a9fd64b *man/ggplot2_dotplot.Rd
9637c0835ec129445ca85f4038664ee2 *man/ggplot2_intersectPlot.Rd
1c7f861f2f649eb25c9348303d7a856a *man/ggplot2_marginPlot.Rd
5edf5c821cb115a4a85e7d4794a63c18 *vignettes/ERSSA.Rmd
2988ea7ba7a2dd8e5f418aefa1556d30 *vignettes/Figures/Fossum/ERSSA_plot_1_NumOfDEGenes_AbslogFC0.5_title.png
cf9fce4651c207ae05bc2ab6679cdcee *vignettes/Figures/Fossum/ERSSA_plot_1_NumOfDEGenes_AbslogFC1_title.png
c57b2ac61887d1234bf597cccdcb4ff2 *vignettes/Figures/Fossum/ERSSA_plot_2_MarginalNumOfDEGenes.png
e0aa9bbf99130f3cd98ac2a4a4afb846 *vignettes/Figures/Fossum/ERSSA_plot_3_IntersectDEGenes.png
67138ed0b44d893910a10621fbae9823 *vignettes/Figures/Fossum/ERSSA_plot_4_FPRvTPRPlot.png
fe02ec98c9d75387d61c653c7ac5af95 *vignettes/Figures/GTEx/ERSSA_plot_1_NumOfDEGenes.png
4bd55623527a23861b723f3766ad9352 *vignettes/Figures/GTEx/ERSSA_plot_1_NumOfDEGenes_N10_title.png
69d2cb75bc7e3b24da4b9cf49f207516 *vignettes/Figures/GTEx/ERSSA_plot_1_NumOfDEGenes_N25_title.png
88ab2e7151fff732835aefd2ba230921 *vignettes/Figures/GTEx/ERSSA_plot_1_NumOfDEGenes_lowRes.png
a17f8f571407196bc0c44edf68a15947 *vignettes/Figures/GTEx/ERSSA_plot_2_MarginalNumOfDEGenes.png
0c1e709d96e35d6e05057a6115c139a4 *vignettes/Figures/GTEx/ERSSA_plot_3_IntersectDEGenes.png
14721f6451365849d8deee2dda88faf4 *vignettes/Figures/GTEx/ERSSA_plot_4_FPRvTPRPlot.png
2008685d9518fce01052b8208dbe275f *vignettes/Figures/MP/ERSSA_plot_1_NumOfDEGenes.png
8df905dbb4a6d1c2d1c277925a3b0e9e *vignettes/Figures/MP/ERSSA_plot_2_MarginalNumOfDEGenes.png
23ab511b7598ac35e0596ad7b30652d0 *vignettes/Figures/MP/ERSSA_plot_3_IntersectDEGenes.png
6f7fe356e029b4518d19d7ed5f9f8930 *vignettes/Figures/MP/ERSSA_plot_4_FPRvTPRPlot.png
