f87ef290340322089c32b4e573d8f1e8 *CONDUCT.md
b88f0603c0cfa06ee2277ef479638bce *DESCRIPTION
eb1e647870add0502f8f010b19de32af *LICENSE
09d901d1250587dafbd475291490f931 *NAMESPACE
ffa728d0a8803452803c7ba4d181e638 *NEWS.md
0fed3a8383e1d1c6478bd83d841c1ac5 *R/AllClasses.R
898c7a7e70b117be98a7ef779bcf16c6 *R/GatingSet2cytobank.R
b2efae3f8c156905178e5406b794be8a *R/GatingSet2flowJo.R
a452b6743654aadf41036eaffe365ec8 *R/compensation.R
f09d5cb0981bcf4c17df93f90df639ad *R/cpp11.R
3914051a7c2bdb2488b8c601914440da *R/cytobank2GatingSet.R
32f7f7ed02f837dd616165112a7e782c *R/cytobankExperiment.R
58eceabbdddcfe578920cf602d2b7e8a *R/cytolibml_bin_path.R
617b66dfd5fa701730eb3f2db82e4470 *R/cytolibml_bin_path.R.in
7c3b30ace0262e6b0b8d260c827efdf3 *R/diva2GatingSet.R
67170c308191262a9acddcf6568e722d *R/flowJoWorkspace_Methods.R
199972c96b6e71a07a07929f7ecea7d4 *R/flowUtils_functions.R
9850419fc19115878ccf2b0b08294598 *R/gate-methods.R
d3bf17ca75918b065a560794614bbafb *R/gatingML.R
f2d1b5173227e4539d92d9d0d1f0fdde *R/graphGML_methods.R
11503aac072e8c5ebfd20292eef14a0e *R/helperFunctions.R
d0cfb9a98d806ca6214296dbf5b898e5 *R/parameter-methods.R
38c762954187bd88b9e9531001e3d64b *R/read.gatingML.cytobank.R
e6db9db9a9b8ad53e14d6b88f92d05f3 *R/transforms.R
ee739d572d64e5f69be2b0159b793796 *R/utils.R
1a2de46841f451d652650477a0fdd95b *R/writeGatingML.R
24a59e362bd7af0d5b85388f895dfd5e *README.Rmd
952ad4c46a5cb6481bd37205ed780932 *README.md
5c5e90de87c945cb7534c3fdfd22a1af *README_files/figure-gfm/unnamed-chunk-3-1.png
514720b7a62ecf372dd1fc14f1c32dff *README_files/figure-gfm/unnamed-chunk-3-2.png
329a24c53f49d01160c1594c6ca04642 *README_files/figure-gfm/unnamed-chunk-4-1.png
514720b7a62ecf372dd1fc14f1c32dff *README_files/figure-gfm/unnamed-chunk-6-1.png
9c2bbfe7ebcfab6ec0604a4ad71f32e0 *README_files/figure-gfm/unnamed-chunk-7-1.png
f7100176ab55b2dba1ccd4a3b078b675 *_pkgdown.yml
8eedfb02e293d6c91f558fc1d3a17d6f *build/vignette.rds
53cb74c799b368f0d065dae75ce9c123 *configure
1ad3a3e00ee79e2a65f7b102c3a61058 *configure.ac
21ce5c5b50a5aaa658db6f4e72333250 *docs/404.html
6c6d54bb814d9f547623b37671bcb3f7 *docs/CONDUCT.html
99ec481e0ea420959424753ee5ff8c95 *docs/LICENSE-text.html
6502d7616523d43b9f3dda05cf7d4b2e *docs/apple-touch-icon-120x120.png
46cef90f417baf0f2d0d35b83f7b10e5 *docs/apple-touch-icon-152x152.png
e55800c5e44b49b76045b359b6340cd9 *docs/apple-touch-icon-180x180.png
ff48434d22a251893c16f0b076e1bece *docs/apple-touch-icon-60x60.png
6667e344066ed15ee4851242eb0abe95 *docs/apple-touch-icon-76x76.png
e55800c5e44b49b76045b359b6340cd9 *docs/apple-touch-icon.png
8b9792913676773c6308f8f5b81c51b4 *docs/articles/HowToExportGatingSet.html
53c42ac72d71beb8e6dbffe86ab543d6 *docs/articles/HowToExportGatingSet_files/accessible-code-block-0.0.1/empty-anchor.js
378f5e45b3039eb9940437bd19718cc7 *docs/articles/HowToExportGatingSet_files/figure-html/unnamed-chunk-3-1.png
9c32b58ed5fd8fe2efbd5bd7023cdef0 *docs/articles/HowToExportGatingSet_files/header-attrs-2.3/header-attrs.js
ada497470cdbae8e1b42bd648f2b588d *docs/articles/cytobank.png
380cb393c100c0e3f5745b0dabfeea1c *docs/articles/cytobank2GatingSet.html
53c42ac72d71beb8e6dbffe86ab543d6 *docs/articles/cytobank2GatingSet_files/accessible-code-block-0.0.1/empty-anchor.js
05e0e1c603ccebcbdfdcddccfd119cd1 *docs/articles/cytobank2GatingSet_files/figure-html/unnamed-chunk-6-1.png
9c32b58ed5fd8fe2efbd5bd7023cdef0 *docs/articles/cytobank2GatingSet_files/header-attrs-2.3/header-attrs.js
819f1febb238fb2a39739d8b6abf2057 *docs/articles/flowJo.png
08bad4b202184f7b44ad6c20904b4619 *docs/articles/index.html
1a3bc6df8d4887995cff735eb21bfb3f *docs/authors.html
5eec6702c35b15a8c2c123301987735d *docs/bootstrap-toc.css
aaa610b29d895e1128447e76b9bc0076 *docs/bootstrap-toc.js
828dbea96017a994efccb7c30c041577 *docs/docsearch.css
2f3c1f7995c9f4f966323f008e3984ad *docs/docsearch.js
a9e25e325bf60dad93e175330ca34678 *docs/favicon-16x16.png
9bf846523793a92908d703137449fc84 *docs/favicon-32x32.png
ace94cc8dd69a9f142eb249f93ae2278 *docs/favicon.ico
32617be83a5bd3015a24e57710ea0f73 *docs/index.html
4759f31f8a585e9af173fc579d730265 *docs/link.svg
d5027883fb2a194dc7e076d51d0bace7 *docs/logo.png
46cef90f417baf0f2d0d35b83f7b10e5 *docs/logo_mid.png
7e6ffd7a166c286fe58a34ccd434bcb1 *docs/news/index.html
0bfb8788900f85687f12d33c3a75c9f0 *docs/pkgdown.css
e0bdbf3c19a222385db6b4dae0682e5b *docs/pkgdown.js
ad934f44876fd570511bce7e6e12c08c *docs/pkgdown.yml
0e902d243a1ffa4a0b4aa016e224a388 *docs/reference/CytoML-deprecated.html
f7da96c5f850ec42983a7b188d9e990a *docs/reference/CytoML.par.get.html
8542638782164f4ca499e91d37e865e2 *docs/reference/CytoML.par.init.html
fe772bb7f7931a4d226a5f106b3269a1 *docs/reference/addCustomInfo.html
ce60a4fbb0b8f1469c2b3d55fb34537a *docs/reference/ce_get_compensations.html
b235e7abdb454e2eb3e4f163f4230fd6 *docs/reference/ce_get_panels.html
d7e49e6096c050c72db128b663c15476 *docs/reference/ce_get_samples.html
c4ebbccccb582278bf1ebca264c8599d *docs/reference/ce_get_transformations.html
5d2a5caeaedc29962689b35c2199e0e7 *docs/reference/compensate-GatingSet-graphGML-method.html
f3c4abc9e39e36bd701109e16311f9ac *docs/reference/constructTree.html
d7278566a5b3b69dc45987113e3cb5aa *docs/reference/cytobank_experiment-methods.html
e855c1e95b1b0434d23568b24f98532c *docs/reference/cytobank_to_gatingset.html
f3baad6292298bb61666b735379c5f54 *docs/reference/diva_get_sample_groups.html
aa4ad479fb6646d26bfbf5d724777819 *docs/reference/diva_get_samples.html
3af5e4ee9bd56777ceca49371f079c7a *docs/reference/diva_to_gatingset.html
acb02e432ea0334c5229b01886f08bf1 *docs/reference/diva_workspace-class.html
41128e14903beda6113a07056275c406 *docs/reference/extend-1.png
22cf3f7c85840dff8d28a0ddfff348c5 *docs/reference/extend.html
bf379eb7e952168838d4baff8cdb4c81 *docs/reference/fj_ws_get_keywords.html
81a9cd68448fa40c3b7e991d1866d91b *docs/reference/fj_ws_get_sample_groups.html
c2def5ff1b1205841df74aeebf4b75e4 *docs/reference/fj_ws_get_samples.html
f14979fa5cf93a309773155b07de5032 *docs/reference/flowjo_to_gatingset.html
9d8df654c3f923b52ec4e716595fa2cc *docs/reference/flowjo_workspace-class.html
48a84efcd5061a067ea8346cfcaab2b0 *docs/reference/gating-methods.html
46844d07f5686f870f8aa454af0a71a1 *docs/reference/gatingset_to_cytobank.html
6333ca7dc996eb6a04cd5a371255fc59 *docs/reference/gatingset_to_flowjo.html
d01668df02eebd84479425f3b813438b *docs/reference/getChildren-graphGML-character-method.html
b86856185fd517fa044f3139d43b4e22 *docs/reference/getCompensationMatrices.graphGML.html
8bbab2775cdaa9a7715273a21a70c156 *docs/reference/getGate-graphGML-character-method.html
6da5b874dafaef7aaf1b7aa96e42eecd *docs/reference/getNodes-graphGML-method.html
5b9372ccccd5df8c12db668a441bfe58 *docs/reference/getParent-graphGML-character-method.html
71d6e666b770f27b73ef96bd22617827 *docs/reference/getTransformations.graphGML.html
0dc28aa4dcc2203b8718ad14b631eee0 *docs/reference/graphGML-class.html
ac6d10165176241fb992a14ab9843e5e *docs/reference/gs_compare_cytobank_counts.html
69e70a19523b17551fc471ae60a2c593 *docs/reference/index.html
6be866ec96370f66f35ec2032130645d *docs/reference/matchPath.html
a8cacd26e7fb98d27b0480976a236e50 *docs/reference/open_cytobank_experiment.html
0a1b95bb5ea08f017221f8016dadd3c2 *docs/reference/open_diva_xml.html
e76149ad1504974a8f289cd3e4a5d291 *docs/reference/open_flowjo_xml.html
5110fcc3f3ee5506d5c7811b19ffbdc7 *docs/reference/parse.gateInfo.html
3d39be75a954a54661d55ee7d37e5c04 *docs/reference/plot-graphGML-missing-method.html
d356bc5f8385334a097f34f8823db52e *docs/reference/range.GatingHierarchy.html
1cc04fddf02db0866fea3738e4d323fb *docs/reference/read.gatingML.cytobank.html
69a263a8aa56f3ae9de24e39e793e888 *docs/reference/show-graphGML-method.html
61515db4ece4319da20e18b7fca0c98a *inst/CITATION
0ffe2e37e1f7e3f2c1a5b7a747d42595 *inst/cppTest/unitTest/gatingSet_test.cpp
c1553c2fbd94f2c49c266697e79bcd74 *inst/cppTest/unitTest/testSuite.cpp
e1fbaa1169c6f40e065ff95edda7381a *inst/cppTest/unitTest/test_header.hpp
2150bfcad96871b99b7cda6e8a4bc92e *inst/defaults.xml
6d934963bb4359b59a2abd4db6ffd8f6 *inst/doc/HowToExportGatingSet.R
d5f83c7b6e4211ee13e7bfc6dbc49a41 *inst/doc/HowToExportGatingSet.Rmd
0fd771b519a3b9010f51ba38a1f20566 *inst/doc/HowToExportGatingSet.html
7f1e14ad0afb9772bf6df97e10028b5c *inst/doc/cytobank2GatingSet.R
f7c7cbaa6dbdf76352d97d1a33bff3f9 *inst/doc/cytobank2GatingSet.Rmd
195e84b122c995f382973d7c6be41be6 *inst/doc/cytobank2GatingSet.html
3055c74e17ef6f240ab51289e797ce51 *inst/doc/flowjo_to_gatingset.R
e1fa53bfe5b8ea1000cc1c70d3cd274a *inst/doc/flowjo_to_gatingset.Rmd
47bb5bf7c25d94d001b131e42a5a2e8d *inst/doc/flowjo_to_gatingset.html
1ad9c07ea377d75109c44bb0f147f8a1 *inst/extdata/cytobank_experiment.acs
61e954500707918eaadcf42bffd8816d *inst/extdata/cytotrol_tcell_cytobank_logt_counts.csv
b4f8348b26e1638b546120c6f421551f *inst/extdata/logtGml.xml
0d84e4970ccb5409a78225427ff20bc7 *inst/extdata/winlist.wlx
ada44c8b07bcac03e92f5d2dddfdc260 *inst/include/CytoML/flowJoWorkspace.hpp
19cf1e869478589913fc390f40ce71f7 *inst/include/CytoML/macFlowJoWorkspace.hpp
8990654d254a2704759e6251f523a0aa *inst/include/CytoML/openWorkspace.hpp
8000e6d738faee1ef7ee5ff2a01bc840 *inst/include/CytoML/search_sample.hpp
35caccd2f906f9a0b36741c723cfdb6e *inst/include/CytoML/winFlowJoWorkspace.hpp
3ab725c09cd72584add26528ca0d69f5 *inst/include/CytoML/workspace.hpp
98c524e1ad3a8b198f2877495649db94 *inst/include/CytoML/workspace_type.hpp
6d9331b3f4ef47b27cc4f47c3c156b37 *inst/include/CytoML/wsNode.hpp
703a637d3b051d8fede1c383773d3968 *inst/schema/CytoML.v1.0.xsd
d5027883fb2a194dc7e076d51d0bace7 *logo.png
46cef90f417baf0f2d0d35b83f7b10e5 *logo_mid.png
48217ff231ac0964d3f269fde26e5e67 *man-roxygen/template-depr_fun.R
eec28e580b0615742f11fb0832014af0 *man-roxygen/template-depr_pkg.R
92325f683b5925e254e7f38c70c02884 *man/CytoML-deprecated.Rd
abc3c54cb95508690b76dd9bc4362b02 *man/addCustomInfo.Rd
8d6d22b727f1c312dc1cf61e399dc13e *man/ce_get_channels.Rd
03f1f07447c5b582aa94aafc393cb060 *man/ce_get_compensations.Rd
0068ffaa5e39eb39ebdff1df0f1017e9 *man/ce_get_markers.Rd
131687f9ad53bba3c8047517075b804c *man/ce_get_panels.Rd
362d99a3e0d9c868fbeabbe3f45f378e *man/ce_get_samples.Rd
af37a18ea377f92d70e7c42d0b25e4d0 *man/ce_get_transformations.Rd
36af3638ca412c04e164204507596446 *man/compensate-GatingSet-graphGML-method.Rd
98bc884455171391f0db059186050527 *man/constructTree.Rd
b6743493e48f74b39afbe0c985aa9155 *man/cytobank_experiment-methods.Rd
9b853d401684598ee596161237889d28 *man/cytobank_to_gatingset.Rd
80e2563cb71f2b616e09b351488da4b5 *man/diva_get_samples.Rd
dc3b67aff05aafde77087f2031e2fc2c *man/diva_to_gatingset.Rd
305d08d19abb214c39e1b447bafaff08 *man/diva_workspace-class.Rd
448a5cabfc0cfc22cad48b45325cc229 *man/extend.Rd
e8ec4d8e9f85748b5232f928aeec435c *man/fj_ws_get_keywords.Rd
c87181662892a78cf9f813d8fbb9ca32 *man/fj_ws_get_sample_groups.Rd
015e99f7aba125ef7a5e5fbfadc4fc08 *man/fj_ws_get_samples.Rd
390c7328ce3ae88617b94692c8258b59 *man/flowjo_to_gatingset.Rd
d555e5ef67029788aa182afe176d0b1c *man/flowjo_workspace-class.Rd
07bfdb81599d297dd8c87318d6fce5f1 *man/gatingset_to_cytobank.Rd
33b656e566a826086d0d2a9834e4d652 *man/gatingset_to_flowjo.Rd
dd833580c7e604375692ecaf92459599 *man/getChildren-graphGML-character-method.Rd
f71cab216c9e6889b9664b1bc5c8f754 *man/getCompensationMatrices.graphGML.Rd
e026dfa3cc157191a241aa839bb9bc5c *man/getGate-graphGML-character-method.Rd
8e61131907adc9a675dffcbfcdea7b76 *man/getNodes-graphGML-method.Rd
85bf196b9abc418a1f220b40f38b7171 *man/getParent-graphGML-character-method.Rd
80faf47555d29f14f0f2ef64a0980c0b *man/getTransformations.graphGML.Rd
4de632a6de49588ce4143baeac0122e6 *man/graphGML-class.Rd
6069cd6edb470a5cd6ebabd02a7d2c23 *man/gs_compare_cytobank_counts.Rd
d38c06770b9f888c1e1abe72f69ab29e *man/matchPath.Rd
e896e476512fef815ea5f18053e3cac6 *man/open_cytobank_experiment.Rd
78e5e233da20fc5e6f9d0df465409129 *man/open_diva_xml.Rd
7067669818814d4171f82fa83bf8b6d4 *man/open_flowjo_xml.Rd
24f069b476d46164136d1b4fd01b9620 *man/parse.gateInfo.Rd
a1370c11d75a1e97cb56b042f166d3e2 *man/plot-graphGML-missing-method.Rd
eb924e469be1c18ebda6f9dd1c3cf96f *man/range.GatingHierarchy.Rd
d8b139d8b04348846409b5989b0bcc8c *man/read.gatingML.cytobank.Rd
00a4f3c8e420cad255915f8bbdf8684c *man/show-graphGML-method.Rd
6502d7616523d43b9f3dda05cf7d4b2e *pkgdown/favicon/apple-touch-icon-120x120.png
46cef90f417baf0f2d0d35b83f7b10e5 *pkgdown/favicon/apple-touch-icon-152x152.png
e55800c5e44b49b76045b359b6340cd9 *pkgdown/favicon/apple-touch-icon-180x180.png
ff48434d22a251893c16f0b076e1bece *pkgdown/favicon/apple-touch-icon-60x60.png
6667e344066ed15ee4851242eb0abe95 *pkgdown/favicon/apple-touch-icon-76x76.png
e55800c5e44b49b76045b359b6340cd9 *pkgdown/favicon/apple-touch-icon.png
a9e25e325bf60dad93e175330ca34678 *pkgdown/favicon/favicon-16x16.png
9bf846523793a92908d703137449fc84 *pkgdown/favicon/favicon-32x32.png
ace94cc8dd69a9f142eb249f93ae2278 *pkgdown/favicon/favicon.ico
78948947eee913c010e13fbbb02d99ae *src/CytoML_types.h
49a4c23ac2b521df5c61c7e29b1ac4f5 *src/Makevars
d68532d12fe327003f89f68c3b9fdb70 *src/Makevars.in
082fd6b5366cbe461ccf26ae7982b4f4 *src/Makevars.ucrt
13be71b37f0c3a06205d0988c8ccf57e *src/Makevars.win
5ef15be222c140acdc36ed01017f5ad5 *src/cpp11.cpp
cd74c6ba87ac8fb9dc295a9a401e8a15 *src/parseFlowJoWorkspace.cpp
6b4d1872aa2ec62b3ca3e26291b87c2a *tests/testthat.R
62b754e6b6e57d57f28a4195d9185ee2 *tests/testthat/Cytobank2GatingSet-InternalTestSuite.R
12a80abe17e8cd71778653cae17bbfa1 *tests/testthat/GatingSet2flowJo-InternalTestSuite.R
6f764912d6b0423bd0acfabd5065541e *tests/testthat/diva2gs-InternalTestSuite.R
b6769034051218e92369e58e6af7d527 *tests/testthat/expect_result/flowJoWorkspace_expect.rds
a230e9e33ce9c5d8b2fe8d69d1398d88 *tests/testthat/flowJoWorkspace-testSuite.R
4e8dc14e2427cde737fc6ec9a99d557c *tests/testthat/flowjo2gs_internalTestSuite.R
63a89da21aac6c6d1f21a3bfbe2f4bae *tests/testthat/helper-lib.R
2b3e35548573f73a3e855099e12c1383 *tests/testthat/test-GatingSet2flowJo.R
0c04e9e3971b8b854d199a1f42100089 *tests/testthat/test-cytobank.R
c92743124787b987fe8d8f5ce89acd20 *tests/testthat/test-diva2gs.R
127b76b6f7123908ae51a1762b6982c7 *tests/testthat/test-extend.R
3d9ad8f8770dc27542ac394f8b2e58d3 *tests/testthat/test-flowjo2gs.R
fd591a6eea6dc9db2ef3af8e1c1e9bd7 *tests/testthat/test-internal-suite.R
3e59936d5eff44f9725265ab5a253510 *tools/winlibs.R
d5f83c7b6e4211ee13e7bfc6dbc49a41 *vignettes/HowToExportGatingSet.Rmd
ef33e0a87802d93b6a9e43177d416522 *vignettes/HowToParseGatingML.html
ada497470cdbae8e1b42bd648f2b588d *vignettes/cytobank.png
f7c7cbaa6dbdf76352d97d1a33bff3f9 *vignettes/cytobank2GatingSet.Rmd
819f1febb238fb2a39739d8b6abf2057 *vignettes/flowJo.png
e1fa53bfe5b8ea1000cc1c70d3cd274a *vignettes/flowjo_to_gatingset.Rmd
