06c646cf062e831d6bf0de26caf3b6eb *DESCRIPTION
c3c52c5afe9bc8dd219c165bd705d70b *NAMESPACE
42044788378d152d3c1262a38b37ff02 *NEWS.md
9d0b228f0dc108565cd8aa3b391d8090 *R/DEgenes.R
dde1a2cfb5ad2d7651920e256702ac00 *R/QCfunctions.R
b3b5274f5d8cc4ec6cd1c5781181527f *R/RcppExports.R
e8ea13f8f03edea8e442daa8282b4ff2 *R/clustering.R
36c9c833a1c92190d3bcebfd81cc9ce2 *R/data.R
97531de218268e11be6730ddf179f524 *R/geneADTnetwork.R
66bd3116ff710388aab4064cbac8abe7 *R/importanceADT.R
71eee7852ef47ee69066be08db84f220 *R/ligandReceptor_analysis.R
8840f463f0ddac67c771a1534eb1999f *R/runSNF.R
a89db05be2791cdd6d4bf642eb99280b *R/utils.R
c1acb592cc868f2750b4f6521cf17190 *R/visualise_features.R
ea1e2eaa4f9f66663bc607d8ffdfa81d *README.md
6c6fc35d8a1ef7e3788a93a3c1a2054e *build/vignette.rds
c1142fa51f5dd9cf745de1729d12ba36 *data/CITEseq_example.rda
2f621ef6bbe90d40968efe8867b453ae *data/datalist
6ed15a4d09c4f98fe98ff6a7ceed361c *data/lr_pair_subset.rda
0c11125f1bd044e4b958116f1e14219d *data/sce_control_subset.rda
1d8a40eb7ef0bcca951e6c14d4dbd0a4 *data/sce_ctcl_subset.rda
30469d4be972c3773876d147e50f86e3 *inst/CITATION
baba4ffecfc71e1124790bc237afa356 *inst/doc/CiteFuse.R
5711eb5d7779e44eaa251ddf22dce816 *inst/doc/CiteFuse.Rmd
1a604ae8b5c3a0c30eb8d639deca48e2 *inst/doc/CiteFuse.html
875e664c5b7c1716ff6afe9844f6e3e4 *inst/figures/CiteFuse_overview.png
4c19cd624b45dad37d8cafe5581e63f9 *man/CITEseq_example.Rd
d91ffd6221c12834b32a2bf7be0ca3a8 *man/CiteFuse.Rd
88609fbb4bcd5eaf5ccbfa3ab4767fcb *man/DEbubblePlot.Rd
20fd00dbe7c909c75255dac49a2a7073 *man/DEcomparisonPlot.Rd
809cb2c2c112d3d627542849b739c7ff *man/DEgenes.Rd
3d5df345493c3cfa8e5cca24843ea0fa *man/DEgenesCross.Rd
d3ee9e7a296e766608eab44169ae5da0 *man/crossSampleDoublets.Rd
d2ee5d20ba2c2104fff0dc03c85aea82 *man/geneADTnetwork.Rd
f55a0a6777a0f50efc9a8ed8cf1e581b *man/igraphClustering.Rd
5a3885687d4086d28302c220f56f139d *man/importanceADT.Rd
7f9da84de58a9d0e8e1c08993a4f9250 *man/ligandReceptorTest.Rd
88de31ec9bf6ea100eb527c780b22940 *man/lr_pair_subset.Rd
7f72f78724ae4b1a516403b06f8c4e9a *man/normaliseExprs.Rd
6fb75182d8874f391d90ead2e462a028 *man/plotHTO.Rd
d76eb721d59b45506e2ca1860a6fdf18 *man/plotHTOSingle.Rd
160043a8e2084e4eadffa8fd64b39839 *man/preprocessing.Rd
6d82db72cb85b3325ca4033a5301906d *man/readFrom10X.Rd
c934164bf14b22730d16eb648cd954fa *man/reducedDimSNF.Rd
a04d81a92cc0342ac06728fee82d62da *man/sce_control_subset.Rd
04f755b020536a715700cb2d14bee8fb *man/sce_ctcl_subset.Rd
2e9e9eaba51d90e4af2e01a7be2f34e3 *man/selectDEgenes.Rd
dadb7cbf384f3890a956b097b7947d01 *man/spectralClustering.Rd
2fd7b31e9b0d6e5128e98aaf09045291 *man/visImportance.Rd
83540b7339baf488d9570b9424073219 *man/visLigandReceptor.Rd
5890eeffb1df8cfc16099b8d05514582 *man/visualiseDim.Rd
f35dd6afa8d30d11d2beea6a367928e1 *man/visualiseExprs.Rd
0e22821af4d6bc78319c71e387fd6ad8 *man/visualiseExprsList.Rd
90e09d6d567fdc2af51e2bc3eb76e115 *man/visualiseKNN.Rd
cab9c209272ddb84346670bb0e120b95 *man/withinSampleDoublets.Rd
609a1fb739b7954bea531d3c2ef0200d *src/RcppExports.cpp
69f2752b928c3f520bff4a829ef00f7a *src/backend.cpp
58f3b385b2823a4ef94f6aa0caa26903 *src/backend.h
639aea58ac9b28b9ced4cb0a6fefccff *src/lr2propr.cpp
5711eb5d7779e44eaa251ddf22dce816 *vignettes/CiteFuse.Rmd
