cb230b082920e743178472ab94a1a4fe *DESCRIPTION
8d36918f7a224edb7dbc732e1cbf66fc *NAMESPACE
058e68a35be8bbb750993bbc3cdd70e6 *NEWS
1afe970f16b98e8cc777b45071a263ed *R/filterCNVs.R
381adb71e6b7735f8d03e9404c5987ce *R/getVariantScore.R
74bd9095a893fab21c00f3bc96a4d56c *R/loadCNVcalls.R
2158d1226edc60da1b5459c59f5c0fd6 *R/loadSNPsFromVCF.R
513e9c8b4b704a85781411a9c87472c0 *R/loadVCFs.R
b3eee92e5d44a1d2b3457f186f0528f8 *R/plotAllCNVs.R
362320ae5138de16bba590471a934115 *R/plotScoringModel.R
45144434f073af137e4ea5a5052a2954 *R/plotVariantsForCNV.R
8c1300bfdf8ff1759ba5af7c57b68a5b *R/utils.R
58d325a4df8442cce4cf975410113e7a *README.md
6302d15d5ee903e64e28bf82f444bb1c *build/vignette.rds
2377204184e8392e502e6812d2816f41 *inst/CITATION
cd3e8c6e545a8ada47b192b240194b26 *inst/doc/CNVfilteR.R
831a60c2880970ffba087571a282e8ca *inst/doc/CNVfilteR.Rmd
cd2dbf70e674b92a29a8f03e0b716e75 *inst/doc/CNVfilteR.html
7afb33704f72f073a65afecc0948c9cb *inst/extdata/DECoN.CNVcalls.2.csv
decd251cc39663dfd1af631cc5de0f5b *inst/extdata/DECoN.CNVcalls.csv
bb207179f474fce2edffbb2e836bd9f0 *inst/extdata/variants.sample1.vcf.gz
10299178e8454474cebfa97b54201e52 *inst/extdata/variants.sample1.vcf.gz.tbi
e0398a12b61964f7c076d670b49acd99 *inst/extdata/variants.sample2.vcf.gz
e29171a98040e6d2ba74fd0e3a428a93 *inst/extdata/variants.sample3.vcf
785923056707b7e2b95fc7dee2f2ea19 *man/auxAddCNcolumn.Rd
1ace54ea33114d9cdb938fa4630fbd61 *man/auxGetVcfSource.Rd
7c534f7e555c824d3a8b92aa33d69305 *man/auxProcessVariants.Rd
96561015840c7496579bb52d93fc4f1b *man/filterCNVs.Rd
54b66508dee3461fdf31c85f0a2ddf36 *man/getVariantScore.Rd
6c22de51463cd844ed710fc106fe1299 *man/loadCNVcalls.Rd
d7df7cdf6a3df987ecc8b33b02831ff1 *man/loadSNPsFromVCF.Rd
8691949d5ac12d4d5a3e7ec0a8aa7042 *man/loadVCFs.Rd
cd860820dc54ea73c54287077ef7629c *man/plotAllCNVs.Rd
0c49e026e84460ed821ff3653f68410b *man/plotScoringModel.Rd
d13330bdf9aa08f3a982b5006c96e4c8 *man/plotVariantsForCNV.Rd
831a60c2880970ffba087571a282e8ca *vignettes/CNVfilteR.Rmd
