93dd6a54a213f092084661af2dc6e7be *DESCRIPTION
5687eda1e9e9f9a1434bcd5fa535f075 *NAMESPACE
b518956a677254f11fb099ce9a913394 *R/analyseTree.R
3b77cf314ef3add86d28794a83aacc7e *R/sample-data.R
aed523e3b8b85b42d85b49504e8a4aec *R/visualiseTree.R
a8a8d0ea5c35c424cf953c807dd808e5 *README.md
8bfbbfdbf26dfb946c98b1312a4fcc1b *build/vignette.rds
39924ef4d002e56aedd9b9748f306fd4 *data/COVIDSampleData.rda
242143ec71ba7b3115a0c6c568958e16 *data/datalist
08cbcf913e464460fc955fab5a34452c *inst/NEWS.Rd
9219cc6b3ef9bb92a4f883b61ce321e4 *inst/doc/vignette.R
f8c74a70ab01fa1c8ebfb16ea6abc9d5 *inst/doc/vignette.Rmd
fbacf31aa5c7bcac0b0ba98a19fa2391 *inst/doc/vignette.html
1a34246e97a621fcab67b61314113064 *inst/extdata/treekoR-logo-01b-png.png
9acb7632e2ea04a23f9fb3f6cb22e09e *man/DeBiasi_COVID_CD8_samp.Rd
8bd7fdad5565e12b9473f8bd7f15da56 *man/addFreqBars.Rd
eecc1cd7a512a45dc5c89892d2abd19b *man/addHeatMap.Rd
7c4dee434a5d14306b4186f77c65b1fd *man/addTree.Rd
459099b1cf7cadce23c154faf236634c *man/colourTree.Rd
f38414ab00b148f706a7b67bbeb13b86 *man/findChildren.Rd
ada696e77baba0ce13898355c8f063a2 *man/geometricMean.Rd
8deb38655f7ecc8ecb118a0fd1058ee7 *man/getCellGMeans.Rd
9766dd873a3b602983490c0bbd7b347b *man/getCellProp.Rd
d637071656a7d65648cae5670af300de *man/getClusterTree.Rd
d3b9e1d6e5e0b0673e0cd2c56c21aee0 *man/getParentProp.Rd
d43aec044fa58f0efe97667e3fc269e1 *man/getTotalProp.Rd
d3470a8ec7abfc1a805ea48824326ed8 *man/getTreeResults.Rd
11c90d93d0e3df182d23dcaa80f675f7 *man/hopachToPhylo.Rd
ff2ffde373e3f8fbdd5a4cf91f33ca56 *man/plotInteractiveHeatmap.Rd
35fff42cbb1a4ecbca00d644272c372d *man/plotSigScatter.Rd
bacc7dec40ae1ac527b80c6b48721860 *man/runEdgeRTests.Rd
572748434f907ba171a6449255e99bfe *man/runGLMMTests.Rd
35517122e605a3d70976e9304a1316a9 *man/runHOPACH.Rd
74c08fef34f68567cd63bf6321a89f57 *man/testTree.Rd
9920c91b153e4f03f941ccb106313aa7 *tests/testthat.R
8555aa9eca352d6fcd22511bbaeeb759 *tests/testthat/test_testTree.R
f8c74a70ab01fa1c8ebfb16ea6abc9d5 *vignettes/vignette.Rmd
