e24bcf86bd2d4bc8682f87ecd95cdc1f *DESCRIPTION
ceab5163905654a229aff963c5cd7d29 *LICENSE
d84344c118b816e9c4a9b6dfa6fccc98 *NAMESPACE
efa11e0feea4d87c520245729b919ebb *NEWS
edcc1466dc8a29afbf6eade4e00f5a14 *R/CoNGAfy.R
14586fb1a00c484eb4d4df68ba9b8dd0 *R/Ibex-package.R
f2a1c6d5a031d585eccf47a3b4419209 *R/Ibex_matrix.R
6615afe6bb4d1e18f5b0ed981b548f77 *R/basiliskEnv.R
9d08073d265cf6d1b6335a4e62535308 *R/combineExpandedBCR.R
031b15dc4cd73383aba229688cf4713c *R/global.R
fd3857dc38d81d41b761a58bcf13d5b9 *R/ibex_example.R
652de2de7c1cbbf4318ddfb924685dfe *R/ibex_vdj.R
b6ef9983b92f870427203d49c0704f38 *R/runIbex.R
d5ea54427b118ebf3c650215b545334a *R/utils.R
5c5e9eae327022df614ba034d5497d81 *R/zzz.R
a1fdfdcc481e2b4a189643cd472aaefc *README.md
a583b91a2e425d0b4d46d00b5ecdff13 *build/vignette.rds
2e00da46276927a0e4f62d60fc5f08bf *data/ibex_example.rda
8a504926a5d8b1b016d8d4e0f6cb570b *data/ibex_vdj.rda
d2415525e0729c856bf183ad8c097f76 *inst/WORDLIST
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714c807dd9179cff6d58f0b9b5584db4 *man/Ibex_matrix.Rd
b25acca134779b3aceb4747ecbaee071 *man/combineExpandedBCR.Rd
01143a6d38bfb4cae4d68926b7ac2c91 *man/filter.cells.Rd
889f17c53bb34ba7ae3962ec497c4d3c *man/ibex_example.Rd
60ea7e2486176e1823d5230a6fdbada2 *man/ibex_vdj.Rd
92fbe612d4dc17ea3e7aab34123d52d5 *man/runIbex.Rd
0622a97a2aaa3c342f09636052c2d7f5 *tests/spelling.R
a95a9ae168c801f8937bd0240291f9e0 *tests/testthat.R
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a19ecf15ad15a85697d6ee2fec2fe432 *tests/testthat/test-combineExpandedBCR.R
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e5d06547256060edfe83f5bee625c06a *tests/testthat/testdata/CoNGAfy/CoNGAfy_counts.rds
743b9d6cc778c6de7732062b5a14322e *tests/testthat/testdata/CoNGAfy/CoNGAfy_mean_counts.rds
133e3082fd2c3f504ba57b385d208fff *tests/testthat/testdata/CoNGAfy/CoNGAfy_mean_meta.data.rds
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c86eda1db83fd99de92568c293f57a3e *tests/testthat/testdata/runIbex/runIbex_Heavy_VAE_OHE_reduction.rds
3256d0f35783717077bd7f155927c26f *tests/testthat/testdata/runIbex/runIbex_Heavy_geometric_reduction.rds
4e5cd8f43722bebb58c118fef6de0122 *tests/testthat/testdata/runIbex/runIbex_Light_AE_KF_reduction.rds
addfc3cbbf7f3a3b39f3256b28b74323 *vignettes/Ibex.Rmd
