Changes in version 0.99.4 - Main changes: - RunParallelDivisiveICP(): adopting BiocParallel interface for parallelization - RunParallelDivisiveICP(): added the RNGseed parameter (set to 123 by default) to ensure reproducibility during parallelization via BiocParallel Changes in version 0.99.0 First release 🎉 - Functions: - AggregateDataByBatch() - RunParallelDivisiveICP() - ReferenceMapping() - GetCellClusterProbability() - SummariseCellClusterProbability() - CellClusterProbabilityDistribution() - BinCellClusterProbability() - TabulateCellBinsByGroup() - CellBinsFeatureCorrelation() - FindClusterMarkers() - FindAllClusterMarkers() - MajorityVotingFeatures() - RunPCA() - RunTSNE() - RunUMAP() - PCAElbowPlot() - PlotDimRed() - PlotExpression() - PlotClusterTree() - VlnPlot() - HeatmapFeatures() - PrepareData() - GetFeatureCoefficients() - Vignettes: - Integration - Reference-mapping - Cell States