Package: qPLEXanalyzer
Type: Package
Title: Tools for quantitative proteomics data analysis
Version: 1.28.2
Date: 2026-01-06
Authors@R: c(person("Matthew","Eldridge", role = "aut"),
             person("Kamal", "Kishore", role = "aut", 
                    email = "kamal.fartiyal84@gmail.com"),
             person("Ashley", "Sawle", role=c("aut", "cre"),
                     email="ads2202cu@gmail.com"))
Description: Tools for TMT based quantitative proteomics data analysis.
License: GPL-2
Imports: assertthat, BiocGenerics, Biostrings, dplyr (>= 1.0.0),
        ggdendro, ggplot2, graphics, grDevices, IRanges, limma,
        magrittr, preprocessCore, purrr, RColorBrewer, readr, rlang,
        scales, stats, stringr, tibble, tidyr, tidyselect, utils
Depends: R (>= 4.0), Biobase, MSnbase
Suggests: patchwork, knitr, qPLEXdata, rmarkdown, statmod, testthat,
        UniProt.ws, vdiffr
VignetteBuilder: knitr
biocViews: ImmunoOncology, Proteomics, MassSpectrometry, Normalization,
        Preprocessing, QualityControl, DataImport
BugReports: https://github.com/crukci-bioinformatics/qPLEXanalyzer/issues
Encoding: UTF-8
RoxygenNote: 7.3.3
Config/pak/sysreqs: libglpk-dev make libicu-dev libxml2-dev
        libnetcdf-dev libssl-dev libx11-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-01-16 10:18:02 UTC
RemoteUrl: https://github.com/bioc/qPLEXanalyzer
RemoteRef: RELEASE_3_22
RemoteSha: bb936d9e67b492de4764c5a1ad4a14cf99591235
NeedsCompilation: no
Packaged: 2026-01-17 03:30:07 UTC; root
Author: Matthew Eldridge [aut],
  Kamal Kishore [aut],
  Ashley Sawle [aut, cre]
Maintainer: Ashley Sawle <ads2202cu@gmail.com>
Built: R 4.5.2; ; 2026-01-17 03:32:46 UTC; windows
