EBS                     accelerated empirical bayesian
LL                      likelihood function for hyperparameters
                        estimation
calD                    calculate distance matrix
clusHelper              function to get intra and inter distance for
                        clusters
detK                    determine the number of clusters
extractInfo             extract count matrix from SingleCellExperiment
                        object
gCl                     gene_level cluster
gRef                    generate reference matrix
genRClus                generate random clusterings
getDD                   index of DD genes under FDR control
getSizeofDD             number of DD genes under FDR control
getZ1Z2                 function to get counts of cluster sizes at two
                        conditions
isRef                   check refinement relation between two clusters
lpt1t2                  log likelihood of z1,z2 given t1,t2
lpzgt                   log likelihood of aggregated multinomial counts
                        z given aggregated proportions t
mdd                     posterior of proportion change given mixture
                        double dirichlet prior
pat                     generating partition patterns
pdd                     calculate posterior probabilities of a gene to
                        be differential distributed
pddAggregate            function to aggregate intermediate results and
                        get prob of DD
rwMle                   MLE for random weighting parameter
scDDboost-package       A compositional model to assess expression
                        changes from single-cell rna-seq data
sim_dat                 scDDboost
