# Generated by roxygen2: do not edit by hand

export(calculateCVGMF)
export(calculateGMF)
export(calculateRankGMF)
export(imputeGMF)
export(plotCV)
export(plotGMF)
export(plotRank)
export(plot_cv)
export(runCVGMF)
export(runGMF)
export(runRankGMF)
export(screeplot_rank)
exportMethods(calculateCVGMF)
exportMethods(calculateGMF)
exportMethods(calculateRankGMF)
exportMethods(imputeGMF)
exportMethods(plot_cv)
exportMethods(runCVGMF)
exportMethods(runGMF)
exportMethods(runRankGMF)
exportMethods(screeplot_rank)
import(ggplot2)
importFrom(BiocParallel,SerialParam)
importFrom(BiocParallel,bpstart)
importFrom(BiocParallel,bpstop)
importFrom(BiocSingular,bsparam)
importFrom(BiocSingular,runPCA)
importFrom(DelayedArray,DelayedArray)
importFrom(DelayedArray,blockApply)
importFrom(DelayedArray,getAutoBPPARAM)
importFrom(DelayedArray,setAutoBPPARAM)
importFrom(Matrix,t)
importFrom(MatrixGenerics,colVars)
importFrom(MatrixGenerics,rowVars)
importFrom(QFeatures,QFeatures)
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,metadata)
importFrom(SingleCellExperiment,"reducedDim<-")
importFrom(SingleCellExperiment,altExp)
importFrom(SingleCellExperiment,reducedDim)
importFrom(SummarizedExperiment,"assay<-")
importFrom(SummarizedExperiment,assay)
importFrom(beachmat,realizeFileBackedMatrix)
importFrom(grDevices,dev.flush)
importFrom(grDevices,dev.hold)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,plot)
importFrom(methods,as)
importFrom(methods,is)
importFrom(scater,plotReducedDim)
importFrom(scuttle,.bpNotSharedOrUp)
importFrom(scuttle,logNormCounts)
importFrom(sgdGMF,sgdgmf.cv)
importFrom(sgdGMF,sgdgmf.fit)
importFrom(sgdGMF,sgdgmf.rank)
importFrom(stats,aggregate)
importFrom(stats,gaussian)
importFrom(utils,head)
