addCentrality	buildGraph
buildDiffGraph	buildGraph
buildGraph	buildGraph
calculateJaccardSimilarity	calculateJaccardSimilarity
enrichPlot	enrichPlot
findDifferentialActivity	findDifferentialActivity
findPartners	findPartners
getSigGenes	getSigGenes
normalizeCentrality	buildGraph
permuteGraph	permuteGraph
plotActivityDim	plotActivityDim
plotActivityViolin	plotActivityViolin
plotBubble	plotBubble
plotDiffNetwork	plotDiffNetwork
plotEpiregulonNetwork	plotEpiregulonNetwork
plotGseaNetwork	plotGseaNetwork
plotHeatmapActivity	plotHeatmapActivity
plotHeatmapRegulon	plotHeatmapRegulon
rankTfs	buildGraph
regulon	regulon
regulonEnrich	regulonEnrich
