.add_tss_annotation	dot-add_tss_annotation
.parse_input_diff	dot-parse_input_diff
.standardize_peaks	dot-standardize_peaks
annotate_with_coaccessibility	annotate_with_coaccessibility
annotate_with_nearest	annotate_with_nearest
atac	atac
cicero_links	cicero_links
compute_spicey_index	compute_spicey_index
entropy_index	entropy_index
extract_gene_peak_annotations	extract_gene_peak_annotations
get_promoters	get_promoters
link_spicey	link_spicey
plot_heatmap	plot_heatmap
prepare_heatmap_data	prepare_heatmap_data
rna	rna
specificity_index	specificity_index
SPICEY	SPICEY
spicey_heatmap	spicey_heatmap
