MethTargetedNGS-package
                        Methylation Analysis of Next Generation
                        Sequencing data.
bconv                   Convert non-bisulfite sequences to bisulfite
                        sequences.
compare_samples         Complete Methylation Analysis of Next
                        Generation Sequencing Data
fishertest_cpg          Perform Fisher Exact Test on Methylation Data.
hmmbuild                Create Profile Hidden Markov Model of given
                        aligned sequences
methAlign               Align sequences with the reference sequence
                        using pairwiseAlignment function from the
                        pwalign package
methAvg                 Calculate Methylation Average of given
                        methylation matrix
methEntropy             Calculate Methylation Entropy
methHeatmap             Generate Heatmap of the given methylation data.
nhmmer                  Calculate likelihood of the given profile
                        hidden markov model against group of sequences
odd_ratio               Calculate log odd ratio of the given samples
                        (healthy/tumor)
