AGDEX-package           Agreement of differential expression analysis
agdex                   Agreement of Differential Expression Analysis
agdex.res               Saved result returned by agdex()
agdex.scatterplot       scatter plot of AGDEX result
get.gset.result.details
                        Extract gene-level details from gene-set
                        results
gset.data               a sample gene-set data
human.data              Sample ExpressionSet object of human data
make.dex.set.object     Make a list object for function agdex()
map.data                Probe-set Mapping Data
mouse.data              Mouse Data
read.agdex.gset.details
                        read detailed results of gene-set analyses
read.agdex.result       Read the output file of agdex analysis
write.agdex.gset.details
                        write the output of get.gset.result.details to
                        a tab-delimited text file.
write.agdex.result      Write the AGDEX results to output file
