# Generated by roxygen2: do not edit by hand

export(allocateCells)
export(corDensity)
export(findNbrsGrid)
export(findNbrsSNN)
export(findNbrsSpatial)
export(findROI)
export(getClusters)
export(getContour)
export(getNiche)
export(globalMoran)
export(gridDensity)
export(gridSPE)
export(localMoran)
export(mergeROI)
export(normalizeAssay)
export(plotCellCompo)
export(plotContour)
export(plotCorHeatmap)
export(plotDR)
export(plotDensCor)
export(plotDensity)
export(plotGrid)
export(plotImage)
export(plotLISA)
export(plotPCA)
export(plotROI)
export(plotSpatial)
export(plotUMAP)
export(postSelRegion)
export(realignVisium)
export(realignVisiumHD)
export(runPCA)
export(runUMAP)
export(selectRegion)
export(spe2PB)
exportMethods("[")
import(SpatialExperiment)
import(ggplot2)
import(knitr)
import(shiny)
import(utils)
importFrom(SpatialPack,modified.ttest)
importFrom(SummarizedExperiment,colData)
importFrom(dbscan,hdbscan)
importFrom(grDevices,colorRampPalette)
importFrom(methods,is)
importFrom(plotly,add_markers)
importFrom(plotly,event_data)
importFrom(plotly,layout)
importFrom(plotly,plot_ly)
importFrom(plotly,renderPlotly)
importFrom(spatstat.explore,bw.diggle)
importFrom(spatstat.explore,density.ppp)
importFrom(spatstat.geom,ppp)
importFrom(stats,cor.test)
importFrom(stats,pchisq)
importFrom(stats,pt)
importFrom(stats,quantile)
importFrom(stats,reshape)
useDynLib(scider, .registration=TRUE)
