KdModel                 miRNA affinity models
KdModelList-class       KdModelList
KdModelList-methods     Methods for the 'KdModelList' classes
SampleKdModel           Example KdModel (hsa-miR-155-5p)
SampleTranscript        Example transcript sequence
aggregateMatches        aggregateMatches
assignKdType            assignKdType
conservation            conservation
dummyKdData             Create dummy log_kd per 12-mer data
findSeedMatches         Predicting and characterizing miRNA binding
                        sites
get3pAlignment          Finds 3' complementary binding of a miRNA
get8merRange            get8merRange
getKdModel              getKdModel
getKmers                getKmers
getMatchTypes           getMatchTypes
getRandomSeq            getRandomSeq
getSeed8mers            getSeed8mers
plotKdModel             plotKdModel
removeOverlappingRanges
                        removeOverlappingRanges
viewTargetAlignment     viewTargetAlignment
