# Generated by roxygen2: do not edit by hand

export(BamtoAspliCounts)
export(calculateOffsets)
export(convertASpli)
export(saseRfindEncodingDim)
export(saseRfit)
import(ASpli)
import(BiocGenerics)
import(DESeq2)
import(GenomicAlignments)
import(GenomicFeatures)
import(GenomicRanges)
import(IRanges)
import(MASS)
import(MatrixGenerics)
import(PRROC)
import(S4Vectors)
import(SummarizedExperiment)
import(edgeR)
import(methods)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpparam)
importFrom(data.table,.N)
importFrom(data.table,data.table)
importFrom(dplyr,`%>%`)
importFrom(dplyr,across)
importFrom(dplyr,group_by)
importFrom(dplyr,mutate)
importFrom(dplyr,summarise)
importFrom(igraph,clusters)
importFrom(igraph,graph_from_edgelist)
importFrom(limma,lmFit)
importFrom(limma,strsplit2)
importFrom(parallel,mclapply)
importFrom(stats,model.matrix)
importFrom(stats,p.adjust)
importFrom(stats,pnbinom)
importFrom(stats,pnorm)
importFrom(stats,qnbinom)
importFrom(stats,rlnorm)
importFrom(stats,rmultinom)
importFrom(stats,runif)
