Uncertainty-aware quantitative analysis of high-throughput live cell migration data


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Documentation for package ‘cellmig’ version 0.99.16

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cellmig-package cellmig: quantifying cell migration with hierarchical Bayesian models
cellmig Model-based quantification of cell migration speed
d Example dataset 'd'
d_mini Example dataset 'd'
gen_full Simulating data from fully generative Bayesian model
gen_partial Simulating data from partially generative Bayesian model
get_dose_response_profile Visualization of dose-response profiles
get_groups Extract group labels
get_pairs Compare the cell migration effects of treatment groups (cellvel results)
get_ppc_means Observed vs. predicted cell migration means in each well
get_ppc_violins Posterior Predictive Checks (PPC) Visualization
get_treatment_profile Visualization of treatment effect profiles
get_violins Generate violin plots for treatment group comparisons