analysis_from_table	analysis_from_table
ARNT.metadata	ARNT.metadata
ARNT.peaks.bed	ARNT.peaks.bed
ChIPDB	ChIPDB
chip_metadata	chip_metadata
contingency_matrix	contingency_matrix
DnaseHS_db	DnaseHS_db
Entrez.gene.IDs	Entrez.gene.IDs
filter_expressed_TFs	filter_expressed_TFs
GeneID2entrez	GeneID2entrez
Genes.Upreg	Genes.Upreg
getCMstats	getCMstats
get_chip_index	get_chip_index
gr.list	gr.list
GSEA.result	GSEA.result
GSEA_EnrichmentScore	GSEA_EnrichmentScore
GSEA_ESpermutations	GSEA_ESpermutations
GSEA_run	GSEA_run
highlight_TF	highlight_TF
hypoxia	hypoxia
hypoxia_DESeq	hypoxia_DESeq
log2.FC	log2.FC
makeChIPGeneDB	makeChIPGeneDB
matrixDB_to_listDB	matrixDB_to_listDB
metaanalysis_fx	metaanalysis_fx
MetaData	MetaData
plot_CM	plot_CM
plot_ES	plot_ES
plot_RES	plot_RES
preprocessInputData	preprocessInputData
rankTFs	rankTFs
Select_genes	Select_genes
set_user_data	set_user_data
TF_ranking2	TF_ranking2
txt2GR	txt2GR
