LinearEmbeddingMatrix   LinearEmbeddingMatrix class
SCE-assays              Named assay getters and setters
SCE-combine             Combining or subsetting SingleCellExperiment
                        objects
SCE-internals           Internal SingleCellExperiment functions
SCE-miscellaneous       Miscellaneous SingleCellExperiment methods
SingleCellExperiment-class
                        The SingleCellExperiment class
[,LinearEmbeddingMatrix,ANY-method
                        LEM subsetting methods
altExps                 Alternative Experiment methods
applySCE                Applying over parts of a SingleCellExperiment
colLabels               Get or set column labels
colPairs                Column pair methods
defunct                 Defunct methods
rbind,LinearEmbeddingMatrix-method
                        LEM combining methods
reduced.dim.matrix      The reduced.dim.matrix class
reducedDims             Reduced dimensions methods
rowPairs                Row pair methods
rowSubset               Get or set the row subset
sampleFactors           LinearEmbeddingMatrix getters/setters
show,LinearEmbeddingMatrix-method
                        Miscellaneous LEM methods
simplifyToSCE           Simplify a list to a single
                        SingleCellExperiment
sizeFactors             Size factor methods
splitAltExps            Split off alternative features
swapAltExp              Swap main and alternative Experiments
unsplitAltExps          Unsplit the alternative experiments
updateObject            Update a SingleCellExperiment object
