ExperimentTranscriptionRates-class
                        Constructor for ExperimentTranscriptionRates
                        object
SimulatePolymerase-class
                        Constructor for SimulatePolymerase object
SimulationTranscriptionRates-class
                        Constructor for SimulationTranscriptionRates
                        object
TranscriptionRates-class
                        Base class for TranscriptionRates objects
TranscriptionRatesLRT-class
                        Constructor for TranscriptionRatesLRT object
estimateTranscriptionRates
                        Generic function for estimating transcription
                        rates
rates                   Accessor for estimated rates
show,ExperimentTranscriptionRates-method
                        Show method for ExperimentTranscriptionRates
                        objects
stericHindrance         Accessor for steric hindrance flag
