# Generated by roxygen2: do not edit by hand

export(envPirat)
export(estimate_gamma)
export(estimate_psi_df)
export(get_indexes_embedded_prots)
export(impute_block_llk_reset)
export(impute_block_llk_reset_PG)
export(impute_from_blocks)
export(my_pipeline_llkimpute)
export(pipeline_llkimpute)
export(pirat2SE)
export(plot2hists)
export(plot_pep_correlations)
export(rm_pg_from_idx_merge_pg)
export(split_large_pg)
export(split_large_pg_PG)
export(wrapper_pipeline_llkimpute)
import(MASS)
import(SummarizedExperiment)
import(ggplot2)
import(grDevices)
import(graphics)
import(invgamma)
import(progress)
importFrom(S4Vectors,metadata)
importFrom(basilisk,BasiliskEnvironment)
importFrom(basilisk,basiliskRun)
importFrom(basilisk,basiliskStart)
importFrom(basilisk,basiliskStop)
importFrom(reticulate,import)
importFrom(stats,cor)
importFrom(stats,cov)
importFrom(stats,lm)
importFrom(stats,var)
