HiCaptuRe-class         HiCaptuRe Class
annotate_interactions   Annotates HiCaptuRe object from
                        load_interactions
digest_genome           Digest genome for a specific restriction enzyme
distance_summary        Computes the number of interactions by distance
export_interactions     Export interactions in the desired output
                        format
getters                 Internal functions to access data held in a
                        HiCaptuRe object.
interactionsByBaits     Filters HiCaptuRe object by baits
interactionsByRegions   Filters HiCaptuRe object by overlaping regions
intersect_interactions
                        Computes the intersect between a list of
                        interactions objects
load_interactions       Loads interaction file into GenomicInteractions
                        Object
peakmatrix2list         Creates a list of HiCaptuRe objects based on a
                        peakmatrix
plot_distance_summary   Generate the plot based on distance output
