| fmds | FMDS calculation using MM algorithm |
| getDistMat | Distance between vectors |
| getIndMat | Get index matrix |
| getP | Compute p-value from PERMANOVA test |
| mdsObj | Objective term of MDS |
| microbiome | Microbiome dataset |
| pairByRank | Get p-value matrix |
| pseudoF | Compute pseudo-F statistic for PERMANOVA |