DataSet                 Datasets
EXTID2NAME              EXTID2NAME
GSEA_internal           GSEA_internal
clusterSim              clusterSim
compareClusterResult-class
                        Class "compareClusterResult" This class
                        represents the comparison result of gene
                        clusters by GO categories at specific level or
                        GO enrichment analysis.
computeIC               compute information content
doseSim                 doseSim
enrichDGN               Enrichment analysis based on the DisGeNET
                        (<http://www.disgenet.org/>)
enrichDGNv              enrichDGN
enrichDO                DO Enrichment Analysis
enrichNCG               enrichNCG
enrichResult-class      Class "enrichResult" This class represents the
                        result of enrichment analysis.
enricher_internal       enrich.internal
gene2DO                 convert Gene ID to DO Terms
geneID                  geneID generic
geneInCategory          geneInCategory generic
geneSim                 geneSim
gseDGN                  DisGeNET Gene Set Enrichment Analysis
gseDO                   DO Gene Set Enrichment Analysis
gseNCG                  NCG Gene Set Enrichment Analysis
gseaResult-class        Class "gseaResult" This class represents the
                        result of GSEA analysis
gsfilter                gsfilter
mclusterSim             mclusterSim
parse_ratio             parse_ratio
setReadable             setReadable
show                    show method
simplot                 simplot
summary                 summary method
theme_dose              theme_dose
