CAFE-package            Chromosomal Aberrations Finder in Expression
                        data
CAFE_data               CAFE data set
ProcessCels             Processing CEL files
armStats                Find aberrations with chromosome arm resolution
bandStats               Find aberrations with cytoband resolution
chromosomeStats         Find aberrations with whole-chromosome
                        resolution
cliSubset               Subset data with a CLI
discontPlot             Plot with discontinuous smoother
discontSmooth           A discontinuous smoother
facetPlot               Plot all chromosomes horizontally next to each
                        other
fisher.method           Combines pvalues by using Fisher's method
guiSubset               Subset data with a GUI
rawPlot                 Plot without any smoother
slidPlot                Plot with sliding average smoother
slidSmooth              A moving average smoother
