Index of /packages/3.21/bioc/src/contrib
Name Last modified Size Description
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PACKAGES.rds 2025-04-24 19:11 163K
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PACKAGES.gz 2025-04-24 19:11 219K
PACKAGES 2025-04-24 19:11 876K
universalmotif_1.26.2.tar.gz 2025-04-24 19:06 3.5M
poem_1.0.1.tar.gz 2025-04-24 19:06 4.4M
RbowtieCuda_1.0.1.tar.gz 2025-04-24 18:40 29M
ZygosityPredictor_1.8.0.tar.gz 2025-04-22 18:38 823K
zlibbioc_1.54.0.tar.gz 2025-04-22 18:38 374K
zitools_1.2.0.tar.gz 2025-04-22 18:38 242K
zinbwave_1.30.0.tar.gz 2025-04-22 18:38 489K
zenith_1.10.0.tar.gz 2025-04-22 18:38 666K
zFPKM_1.30.0.tar.gz 2025-04-22 18:38 147K
zellkonverter_1.18.0.tar.gz 2025-04-22 18:38 1.4M
yarn_1.34.0.tar.gz 2025-04-22 18:38 3.0M
YAPSA_1.34.0.tar.gz 2025-04-22 18:38 4.2M
yamss_1.34.0.tar.gz 2025-04-22 18:38 423K
XVector_0.48.0.tar.gz 2025-04-22 18:38 66K
xmapbridge_1.66.0.tar.gz 2025-04-22 18:38 3.0M
XINA_1.26.0.tar.gz 2025-04-22 18:38 2.7M
Xeva_1.24.0.tar.gz 2025-04-22 18:38 1.6M
xenLite_1.2.0.tar.gz 2025-04-22 18:38 3.2M
XeniumIO_1.0.0.tar.gz 2025-04-22 18:38 229K
XDE_2.54.0.tar.gz 2025-04-22 18:38 1.3M
xcore_1.12.0.tar.gz 2025-04-22 18:38 2.4M
xcms_4.6.0.tar.gz 2025-04-22 18:38 9.5M
xCell2_1.0.0.tar.gz 2025-04-22 18:38 3.1M
XAItest_1.0.0.tar.gz 2025-04-22 18:38 1.0M
wppi_1.16.0.tar.gz 2025-04-22 18:38 647K
Wrench_1.26.0.tar.gz 2025-04-22 18:38 225K
wpm_1.18.0.tar.gz 2025-04-22 18:38 2.4M
wiggleplotr_1.32.0.tar.gz 2025-04-22 18:38 337K
widgetTools_1.86.0.tar.gz 2025-04-22 18:38 227K
weitrix_1.20.0.tar.gz 2025-04-22 18:38 9.5M
webbioc_1.80.0.tar.gz 2025-04-22 18:38 310K
weaver_1.74.0.tar.gz 2025-04-22 18:38 232K
wavClusteR_2.42.0.tar.gz 2025-04-22 18:38 779K
wateRmelon_2.14.0.tar.gz 2025-04-22 18:38 3.3M
waddR_1.22.0.tar.gz 2025-04-22 18:38 152K
vulcan_1.30.0.tar.gz 2025-04-22 18:38 390K
vtpnet_0.48.0.tar.gz 2025-04-22 18:38 20M
vsn_3.76.0.tar.gz 2025-04-22 18:38 1.9M
vsclust_1.10.0.tar.gz 2025-04-22 18:38 3.7M
VplotR_1.18.0.tar.gz 2025-04-22 18:38 5.2M
Voyager_1.10.0.tar.gz 2025-04-22 18:38 4.0M
vissE_1.16.0.tar.gz 2025-04-22 18:38 1.6M
visiumStitched_1.0.0.tar.gz 2025-04-22 18:38 3.5M
VisiumIO_1.4.0.tar.gz 2025-04-22 18:38 1.5M
ViSEAGO_1.22.0.tar.gz 2025-04-22 18:38 8.6M
viper_1.42.0.tar.gz 2025-04-22 18:38 503K
vidger_1.28.0.tar.gz 2025-04-22 18:38 7.9M
VERSO_1.18.0.tar.gz 2025-04-22 18:38 677K
veloviz_1.14.0.tar.gz 2025-04-22 18:38 3.6M
velociraptor_1.18.0.tar.gz 2025-04-22 18:38 815K
VegaMC_3.46.0.tar.gz 2025-04-22 18:38 1.8M
VDJdive_1.10.0.tar.gz 2025-04-22 18:38 551K
VCFArray_1.24.0.tar.gz 2025-04-22 18:38 303K
vbmp_1.76.0.tar.gz 2025-04-22 18:38 1.8M
VaSP_1.20.0.tar.gz 2025-04-22 18:38 8.5M
VariantTools_1.50.0.tar.gz 2025-04-22 18:38 6.0M
VariantFiltering_1.44.0.tar.gz 2025-04-22 18:38 3.6M
VariantExperiment_1.22.0.tar.gz 2025-04-22 18:38 327K
VariantAnnotation_1.54.0.tar.gz 2025-04-22 18:38 2.0M
variancePartition_1.38.0.tar.gz 2025-04-22 18:38 4.7M
VarCon_1.16.0.tar.gz 2025-04-22 18:38 1.9M
VanillaICE_1.70.0.tar.gz 2025-04-22 18:38 2.1M
VAExprs_1.14.0.tar.gz 2025-04-22 18:38 562K
uSORT_1.34.0.tar.gz 2025-04-22 18:38 2.8M
UPDhmm_1.4.0.tar.gz 2025-04-22 18:38 240K
updateObject_1.12.0.tar.gz 2025-04-22 18:38 1.3M
Uniquorn_2.28.0.tar.gz 2025-04-22 18:38 2.2M
unifiedWMWqPCR_1.44.0.tar.gz 2025-04-22 18:38 502K
UniProt.ws_2.48.0.tar.gz 2025-04-22 18:38 241K
UNDO_1.50.0.tar.gz 2025-04-22 18:38 2.9M
uncoverappLib_1.18.0.tar.gz 2025-04-22 18:38 3.4M
UMI4Cats_1.18.0.tar.gz 2025-04-22 18:38 3.7M
Ularcirc_1.26.0.tar.gz 2025-04-22 18:38 5.2M
UCell_2.12.0.tar.gz 2025-04-22 18:38 1.7M
UCSC.utils_1.4.0.tar.gz 2025-04-22 18:38 231K
tximport_1.36.0.tar.gz 2025-04-22 18:38 308K
tximeta_1.26.0.tar.gz 2025-04-22 18:38 1.3M
txdbmaker_1.4.0.tar.gz 2025-04-22 18:38 1.0M
txcutr_1.14.0.tar.gz 2025-04-22 18:38 315K
twoddpcr_1.32.0.tar.gz 2025-04-22 18:38 3.8M
twilight_1.84.0.tar.gz 2025-04-22 18:38 1.2M
tweeDEseq_1.54.0.tar.gz 2025-04-22 18:38 234K
TVTB_1.34.0.tar.gz 2025-04-22 18:38 1.5M
TurboNorm_1.56.0.tar.gz 2025-04-22 18:38 2.0M
TTMap_1.30.0.tar.gz 2025-04-22 18:38 1.6M
ttgsea_1.16.0.tar.gz 2025-04-22 18:38 331K
TSCAN_1.46.0.tar.gz 2025-04-22 18:38 2.7M
TSAR_1.6.0.tar.gz 2025-04-22 18:38 3.9M
TRONCO_2.40.0.tar.gz 2025-04-22 18:38 4.2M
tRNAscanImport_1.28.0.tar.gz 2025-04-22 18:38 847K
tRNAdbImport_1.26.0.tar.gz 2025-04-22 18:38 322K
tRNA_1.26.0.tar.gz 2025-04-22 18:38 1.2M
tripr_1.14.0.tar.gz 2025-04-22 18:38 2.9M
triplex_1.48.0.tar.gz 2025-04-22 18:38 600K
trio_3.46.0.tar.gz 2025-04-22 18:38 753K
TrIdent_1.0.0.tar.gz 2025-04-22 18:38 1.6M
tricycle_1.16.0.tar.gz 2025-04-22 18:38 4.2M
TRESS_1.14.0.tar.gz 2025-04-22 18:38 484K
Trendy_1.30.0.tar.gz 2025-04-22 18:38 1.1M
TREG_1.12.0.tar.gz 2025-04-22 18:38 2.4M
TreeSummarizedExperiment_2.16.0.tar.gz 2025-04-22 18:38 1.1M
treekoR_1.16.0.tar.gz 2025-04-22 18:38 1.6M
treeio_1.32.0.tar.gz 2025-04-22 18:38 679K
treeclimbR_1.4.0.tar.gz 2025-04-22 18:38 679K
TreeAndLeaf_1.20.0.tar.gz 2025-04-22 18:38 5.9M
traseR_1.38.0.tar.gz 2025-04-22 18:38 6.2M
transomics2cytoscape_1.18.0.tar.gz 2025-04-22 18:38 12M
transmogR_1.4.0.tar.gz 2025-04-22 18:38 590K
tRanslatome_1.46.0.tar.gz 2025-04-22 18:38 936K
transite_1.26.0.tar.gz 2025-04-22 18:38 636K
transformGamPoi_1.14.0.tar.gz 2025-04-22 18:38 786K
transcriptR_1.36.0.tar.gz 2025-04-22 18:38 3.6M
transcriptogramer_1.30.0.tar.gz 2025-04-22 18:38 3.6M
TrajectoryUtils_1.16.0.tar.gz 2025-04-22 18:38 336K
TrajectoryGeometry_1.16.0.tar.gz 2025-04-22 18:38 1.9M
tradeSeq_1.22.0.tar.gz 2025-04-22 18:38 5.2M
trackViewer_1.44.0.tar.gz 2025-04-22 18:38 10M
tracktables_1.42.0.tar.gz 2025-04-22 18:38 356K
tpSVG_1.4.0.tar.gz 2025-04-22 18:38 1.2M
TPP2D_1.24.0.tar.gz 2025-04-22 18:38 2.3M
TPP_3.36.0.tar.gz 2025-04-22 18:38 8.4M
ToxicoGx_2.12.0.tar.gz 2025-04-22 18:38 3.9M
topdownr_1.30.0.tar.gz 2025-04-22 18:38 1.5M
topconfects_1.24.0.tar.gz 2025-04-22 18:38 3.6M
TOP_1.8.0.tar.gz 2025-04-22 18:38 489K
tomoseqr_1.12.0.tar.gz 2025-04-22 18:38 1.6M
tomoda_1.18.0.tar.gz 2025-04-22 18:38 2.9M
TOAST_1.22.0.tar.gz 2025-04-22 18:38 3.6M
TnT_1.30.0.tar.gz 2025-04-22 18:38 230K
TMSig_1.2.0.tar.gz 2025-04-22 18:38 3.9M
tLOH_1.16.0.tar.gz 2025-04-22 18:38 2.3M
TMixClust_1.30.0.tar.gz 2025-04-22 18:38 508K
tkWidgets_1.86.0.tar.gz 2025-04-22 18:38 477K
TissueEnrich_1.28.0.tar.gz 2025-04-22 18:38 3.7M
TIN_1.40.0.tar.gz 2025-04-22 18:38 4.6M
timescape_1.32.0.tar.gz 2025-04-22 18:38 673K
timeOmics_1.20.0.tar.gz 2025-04-22 18:38 4.0M
timecourse_1.80.0.tar.gz 2025-04-22 18:38 841K
tilingArray_1.86.0.tar.gz 2025-04-22 18:38 3.5M
tigre_1.62.0.tar.gz 2025-04-22 18:38 317K
TileDBArray_1.18.0.tar.gz 2025-04-22 18:38 305K
tidytof_1.2.0.tar.gz 2025-04-22 18:38 2.5M
tidySummarizedExperiment_1.18.0.tar.gz 2025-04-22 18:38 359K
tidySpatialExperiment_1.4.0.tar.gz 2025-04-22 18:38 4.3M
tidySingleCellExperiment_1.18.0.tar.gz 2025-04-22 18:38 1.8M
tidysbml_1.2.0.tar.gz 2025-04-22 18:38 306K
tidyomics_1.4.0.tar.gz 2025-04-22 18:38 56K
tidyFlowCore_1.2.0.tar.gz 2025-04-22 18:38 784K
tidyCoverage_1.4.0.tar.gz 2025-04-22 18:38 3.7M
tidybulk_1.20.0.tar.gz 2025-04-22 18:38 2.8M
TFutils_1.28.0.tar.gz 2025-04-22 18:38 6.0M
TFHAZ_1.30.0.tar.gz 2025-04-22 18:38 2.5M
TFEA.ChIP_1.28.0.tar.gz 2025-04-22 18:38 5.3M
TFBSTools_1.46.0.tar.gz 2025-04-22 18:38 583K
TFARM_1.30.0.tar.gz 2025-04-22 18:38 470K
terraTCGAdata_1.12.0.tar.gz 2025-04-22 18:38 234K
ternarynet_1.52.0.tar.gz 2025-04-22 18:38 269K
terapadog_1.0.0.tar.gz 2025-04-22 18:38 1.5M
TEQC_4.30.0.tar.gz 2025-04-22 18:38 644K
tenXplore_1.30.0.tar.gz 2025-04-22 18:38 2.4M
TENxIO_1.10.0.tar.gz 2025-04-22 18:38 256K
TENET_1.0.0.tar.gz 2025-04-22 18:38 1.4M
TEKRABber_1.12.0.tar.gz 2025-04-22 18:38 3.4M
TDbasedUFEadv_1.8.0.tar.gz 2025-04-22 18:38 3.8M
TDbasedUFE_1.8.0.tar.gz 2025-04-22 18:38 1.3M
TCseq_1.32.0.tar.gz 2025-04-22 18:38 1.1M
TCGAutils_1.28.0.tar.gz 2025-04-22 18:38 406K
TCC_1.48.0.tar.gz 2025-04-22 18:38 3.2M
TBSignatureProfiler_1.20.0.tar.gz 2025-04-22 18:38 2.9M
TaxSEA_1.0.0.tar.gz 2025-04-22 18:38 395K
TargetSearch_2.10.0.tar.gz 2025-04-22 18:38 719K
TargetScore_1.46.0.tar.gz 2025-04-22 18:38 1.2M
TargetDecoy_1.14.0.tar.gz 2025-04-22 18:38 4.1M
target_1.22.0.tar.gz 2025-04-22 18:38 3.1M
TAPseq_1.20.0.tar.gz 2025-04-22 18:38 2.6M
tanggle_1.14.0.tar.gz 2025-04-22 18:38 2.1M
TADCompare_1.18.0.tar.gz 2025-04-22 18:38 4.1M
tadar_1.6.0.tar.gz 2025-04-22 18:38 1.7M
systemPipeTools_1.16.0.tar.gz 2025-04-22 18:38 1.0M
systemPipeShiny_1.18.0.tar.gz 2025-04-22 18:38 4.3M
systemPipeR_2.14.0.tar.gz 2025-04-22 18:38 6.5M
syntenet_1.10.0.tar.gz 2025-04-22 18:38 2.7M
SynMut_1.24.0.tar.gz 2025-04-22 18:38 105K
synlet_2.8.0.tar.gz 2025-04-22 18:38 1.4M
SynExtend_1.20.0.tar.gz 2025-04-22 18:38 3.1M
synergyfinder_3.16.0.tar.gz 2025-04-22 18:38 6.5M
synapsis_1.14.0.tar.gz 2025-04-22 18:38 3.4M
switchde_1.34.0.tar.gz 2025-04-22 18:38 1.0M
switchBox_1.44.0.tar.gz 2025-04-22 18:38 472K
swfdr_1.34.0.tar.gz 2025-04-22 18:38 1.2M
SwathXtend_2.30.0.tar.gz 2025-04-22 18:38 346M
SWATH2stats_1.38.0.tar.gz 2025-04-22 18:38 3.0M
SVP_1.0.0.tar.gz 2025-04-22 18:38 4.2M
SVMDO_1.8.0.tar.gz 2025-04-22 18:38 2.4M
svaRetro_1.14.0.tar.gz 2025-04-22 18:38 1.6M
svaNUMT_1.14.0.tar.gz 2025-04-22 18:38 813K
sva_3.56.0.tar.gz 2025-04-22 18:38 442K
survtype_1.24.0.tar.gz 2025-04-22 18:38 347K
survcomp_1.58.0.tar.gz 2025-04-22 18:38 639K
survClust_1.2.0.tar.gz 2025-04-22 18:38 806K
surfaltr_1.14.0.tar.gz 2025-04-22 18:38 3.0M
supersigs_1.16.0.tar.gz 2025-04-22 18:38 2.6M
Summix_2.14.0.tar.gz 2025-04-22 18:38 1.3M
SummarizedExperiment_1.38.0.tar.gz 2025-04-22 18:38 673K
subSeq_1.38.0.tar.gz 2025-04-22 18:38 2.9M
SUITOR_1.10.0.tar.gz 2025-04-22 18:38 253K
SubCellBarCode_1.24.0.tar.gz 2025-04-22 18:38 2.3M
StructuralVariantAnnotation_1.24.0.tar.gz 2025-04-22 18:38 1.0M
structToolbox_1.20.0.tar.gz 2025-04-22 18:38 4.7M
Structstrings_1.24.0.tar.gz 2025-04-22 18:38 367K
STRINGdb_2.20.0.tar.gz 2025-04-22 18:38 9.9M
strandCheckR_1.26.0.tar.gz 2025-04-22 18:38 1.2M
Streamer_1.54.0.tar.gz 2025-04-22 18:38 134K
stJoincount_1.10.0.tar.gz 2025-04-22 18:38 2.7M
stepNorm_1.80.0.tar.gz 2025-04-22 18:38 460K
statTarget_1.38.0.tar.gz 2025-04-22 18:38 779K
Statial_1.10.0.tar.gz 2025-04-22 18:38 9.2M
STATegRa_1.44.0.tar.gz 2025-04-22 18:38 4.9M
standR_1.12.0.tar.gz 2025-04-22 18:38 2.4M
stageR_1.30.0.tar.gz 2025-04-22 18:38 779K
StabMap_1.2.0.tar.gz 2025-04-22 18:38 1.9M
ssviz_1.42.0.tar.gz 2025-04-22 18:38 1.2M
ssrch_1.24.0.tar.gz 2025-04-22 18:38 1.4M
ssPATHS_1.22.0.tar.gz 2025-04-22 18:38 3.7M
sSNAPPY_1.12.0.tar.gz 2025-04-22 18:38 4.0M
ssize_1.82.0.tar.gz 2025-04-22 18:38 545K
sSeq_1.46.0.tar.gz 2025-04-22 18:38 4.2M
sscu_2.38.0.tar.gz 2025-04-22 18:38 1.3M
srnadiff_1.28.0.tar.gz 2025-04-22 18:38 2.4M
SRAdb_1.70.0.tar.gz 2025-04-22 18:38 889K
sRACIPE_2.0.0.tar.gz 2025-04-22 18:38 2.0M
squallms_1.2.0.tar.gz 2025-04-22 18:38 2.2M
SQLDataFrame_1.22.0.tar.gz 2025-04-22 18:38 235K
SPsimSeq_1.18.0.tar.gz 2025-04-22 18:38 766K
spqn_1.20.0.tar.gz 2025-04-22 18:38 2.9M
SpotSweeper_1.4.0.tar.gz 2025-04-22 18:38 3.2M
SPOTlight_1.12.0.tar.gz 2025-04-22 18:38 3.7M
SpotClean_1.10.0.tar.gz 2025-04-22 18:38 3.9M
spoon_1.4.0.tar.gz 2025-04-22 18:38 461K
SPONGE_1.30.0.tar.gz 2025-04-22 18:38 8.9M
splots_1.74.0.tar.gz 2025-04-22 18:38 669K
SPLINTER_1.34.0.tar.gz 2025-04-22 18:38 961K
splineTimeR_1.36.0.tar.gz 2025-04-22 18:38 1.2M
SplineDV_1.0.0.tar.gz 2025-04-22 18:38 2.4M
SplicingGraphs_1.48.0.tar.gz 2025-04-22 18:38 46M
SplicingFactory_1.16.0.tar.gz 2025-04-22 18:38 755K
SpliceWiz_1.10.0.tar.gz 2025-04-22 18:38 4.8M
splatter_1.32.0.tar.gz 2025-04-22 18:38 6.7M
spkTools_1.64.0.tar.gz 2025-04-22 18:38 664K
spillR_1.4.0.tar.gz 2025-04-22 18:38 430K
spiky_1.14.0.tar.gz 2025-04-22 18:38 14M
spikeLI_2.68.0.tar.gz 2025-04-22 18:38 394K
spicyR_1.20.0.tar.gz 2025-04-22 18:38 3.2M
SPIAT_1.10.0.tar.gz 2025-04-22 18:38 7.4M
SPIA_2.60.0.tar.gz 2025-04-22 18:38 2.5M
SPEM_1.48.0.tar.gz 2025-04-22 18:38 601K
SpectraQL_1.2.0.tar.gz 2025-04-22 18:38 513K
SpectralTAD_1.24.0.tar.gz 2025-04-22 18:38 1.5M
Spectra_1.18.0.tar.gz 2025-04-22 18:38 1.8M
SpeCond_1.62.0.tar.gz 2025-04-22 18:38 1.7M
specL_1.42.0.tar.gz 2025-04-22 18:38 2.1M
speckle_1.8.0.tar.gz 2025-04-22 18:38 1.4M
spatzie_1.14.0.tar.gz 2025-04-22 18:38 1.9M
spatialSimGP_1.2.0.tar.gz 2025-04-22 18:38 695K
SpatialOmicsOverlay_1.8.0.tar.gz 2025-04-22 18:38 4.3M
spatialHeatmap_2.14.0.tar.gz 2025-04-22 18:38 31M
SpatialFeatureExperiment_1.10.0.tar.gz 2025-04-22 18:38 1.8M
spatialFDA_1.0.0.tar.gz 2025-04-22 18:38 3.5M
SpatialExperiment_1.18.0.tar.gz 2025-04-22 18:38 5.2M
SpatialExperimentIO_1.0.0.tar.gz 2025-04-22 18:38 608K
SpatialDecon_1.18.0.tar.gz 2025-04-22 18:38 5.1M
SpatialCPie_1.24.0.tar.gz 2025-04-22 18:38 1.0M
spaSim_1.10.0.tar.gz 2025-04-22 18:38 3.4M
SparseSignatures_2.18.0.tar.gz 2025-04-22 18:38 1.5M
sparsenetgls_1.26.0.tar.gz 2025-04-22 18:38 625K
sparseMatrixStats_1.20.0.tar.gz 2025-04-22 18:38 688K
sparrow_1.14.0.tar.gz 2025-04-22 18:38 4.1M
SparseArray_1.8.0.tar.gz 2025-04-22 18:38 456K
SpaNorm_1.2.0.tar.gz 2025-04-22 18:38 7.5M
Spaniel_1.22.0.tar.gz 2025-04-22 18:38 3.9M
spacexr_1.0.0.tar.gz 2025-04-22 18:38 427K
SpaceMarkers_1.4.0.tar.gz 2025-04-22 18:38 2.8M
sosta_1.0.0.tar.gz 2025-04-22 18:38 5.4M
SOMNiBUS_1.16.0.tar.gz 2025-04-22 18:38 1.1M
SomaticSignatures_2.44.0.tar.gz 2025-04-22 18:38 2.2M
soGGi_1.40.0.tar.gz 2025-04-22 18:38 3.4M
snpStats_1.58.0.tar.gz 2025-04-22 18:38 7.7M
SNPRelate_1.42.0.tar.gz 2025-04-22 18:38 3.3M
SNPhood_1.38.0.tar.gz 2025-04-22 18:38 6.7M
SNPediaR_1.34.0.tar.gz 2025-04-22 18:38 230K
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